RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CCDC186Q7Z3E2 898 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 DHX58Q96C10 678 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 GREB1LQ9C091 1923 aaPredicted RBP21.06■□□□□ 0.96
HOXC11-201ENST00000243082 SIPA1L1O43166 1804 aa21.06■□□□□ 0.96
HOXC11-201ENST00000243082 ARL6IP4Q66PJ3 421 aaKnown RBP21.06■□□□□ 0.96
HOXC11-201ENST00000243082 SPATA20Q8TB22 786 aa21.06■□□□□ 0.96
HOXC11-201ENST00000243082 CCDC12Q8WUD4 166 aaPredicted RBP21.06■□□□□ 0.96
HOXC11-201ENST00000243082 SEC63Q9UGP8 760 aaKnown RBP21.06■□□□□ 0.96
HOXC11-201ENST00000243082 MAN1B1Q9UKM7 699 aa21.06■□□□□ 0.96
HOXC11-201ENST00000243082 OFD1O75665 1012 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 SLFN14P0C7P3 912 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 BAG6P46379 1132 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 SH3RF1Q7Z6J0 888 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 TTLL6Q8N841 843 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 CCDC17Q96LX7 622 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 SMCO2A6NFE2 343 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 MPHOSPH10O00566 681 aaKnown RBP21.05■□□□□ 0.96
HOXC11-201ENST00000243082 INF2Q27J81 1249 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 HSD3B7Q9H2F3 369 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 PI4KBQ9UBF8 816 aa21.05■□□□□ 0.96
HOXC11-201ENST00000243082 KCNA3P22001 575 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 ZNF543Q08ER8 600 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 CCDC144BQ3MJ40 725 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 SMARCE1Q969G3 411 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 FAM196BA6NMK8 535 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 SF3B2Q13435 895 aaKnown RBP21.04■□□□□ 0.96
HOXC11-201ENST00000243082 MORC3Q14149 939 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 GRIPAP1Q4V328 841 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 TDRD3Q9H7E2 651 aaKnown RBP21.04■□□□□ 0.96
HOXC11-201ENST00000243082 C6orf50Q9HD87 102 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 GPCPD1Q9NPB8 672 aa21.04■□□□□ 0.96
HOXC11-201ENST00000243082 GNA11P29992 359 aa21.03■□□□□ 0.96
HOXC11-201ENST00000243082 CFAP100Q494V2 611 aa21.03■□□□□ 0.96
HOXC11-201ENST00000243082 CCDC93Q567U6 631 aa21.03■□□□□ 0.96
HOXC11-201ENST00000243082 PAGE5Q96GU1 130 aa21.03■□□□□ 0.96
HOXC11-201ENST00000243082 PYCARDQ9ULZ3 195 aa21.03■□□□□ 0.96
HOXC11-201ENST00000243082 ESYT2A0FGR8 921 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 hCG_1984214I3L0E3 225 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 TPM4P67936 248 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 E2F4Q16254 413 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 ZNF713Q8N859 430 aaPredicted RBP21.02■□□□□ 0.96
HOXC11-201ENST00000243082 PRMT6Q96LA8 375 aaPredicted RBP21.02■□□□□ 0.96
HOXC11-201ENST00000243082 TMEM60Q9H2L4 133 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 LONP1P36776 959 aaKnown RBP21.02■□□□□ 0.96
HOXC11-201ENST00000243082 MYL5Q02045 173 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 SHROOM1Q2M3G4 852 aaPredicted RBP21.02■□□□□ 0.96
HOXC11-201ENST00000243082 SOGA3Q5TF21 947 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 TATDN1Q6P1N9 297 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 KRT25Q7Z3Z0 450 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 ZSCAN29Q8IWY8 852 aaPredicted RBP21.02■□□□□ 0.96
HOXC11-201ENST00000243082 RTKN2Q8IZC4 609 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 TRIML1Q8N9V2 468 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 KIAA1524Q8TCG1 905 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 PSMD1Q99460 953 aa21.02■□□□□ 0.96
HOXC11-201ENST00000243082 DPEP1P16444 411 aa21.01■□□□□ 0.95
HOXC11-201ENST00000243082 AFMP43652 599 aa21.01■□□□□ 0.95
HOXC11-201ENST00000243082 CERKLQ49MI3 558 aaPredicted RBP21.01■□□□□ 0.95
HOXC11-201ENST00000243082 PPP4R3BQ5MIZ7 849 aa21.01■□□□□ 0.95
HOXC11-201ENST00000243082 CCDC34Q96HJ3 373 aa21.01■□□□□ 0.95
HOXC11-201ENST00000243082 JMJD4Q9H9V9 463 aa21.01■□□□□ 0.95
HOXC11-201ENST00000243082 LMOD1P29536 600 aaPredicted RBP21■□□□□ 0.95
HOXC11-201ENST00000243082 ATP2B2Q01814 1243 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 NOLC1Q14978 699 aaKnown RBP eCLIP21■□□□□ 0.95
HOXC11-201ENST00000243082 TTBK2Q6IQ55 1244 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 ADGRF4Q8IZF3 695 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 C17orf53Q8N3J3 647 aaPredicted RBP21■□□□□ 0.95
HOXC11-201ENST00000243082 MLKLQ8NB16 471 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 MKL1Q969V6 931 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 ENTPD3O75355 529 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 LRMPQ12912 555 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 NONOQ15233 471 aaKnown RBP eCLIP21■□□□□ 0.95
HOXC11-201ENST00000243082 GPATCH4Q5T3I0 446 aaKnown RBP21■□□□□ 0.95
HOXC11-201ENST00000243082 PDZRN4Q6ZMN7 1036 aaPredicted RBP21■□□□□ 0.95
HOXC11-201ENST00000243082 IQUBQ8NA54 791 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 SLC16A10Q8TF71 515 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 COA7Q96BR5 231 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 IFNKQ9P0W0 207 aa21■□□□□ 0.95
HOXC11-201ENST00000243082 MYH4Q9Y623 1939 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 SMC2O95347 1197 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 DPYDQ12882 1025 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 CACTINQ8WUQ7 758 aaKnown RBP20.99■□□□□ 0.95
HOXC11-201ENST00000243082 XPO4Q9C0E2 1151 aaKnown RBP20.99■□□□□ 0.95
HOXC11-201ENST00000243082 NYAP2Q9P242 653 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 ATRNL1Q5VV63 1379 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 PSME4Q14997 1843 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 PNMA6FA0A0J9YX94 578 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 ATP1A3P13637 1013 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 EEF2P13639 858 aaKnown RBP20.99■□□□□ 0.95
HOXC11-201ENST00000243082 CASP1P29466 404 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 PDXDC2PQ6P474 469 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 RSBN1LQ6PCB5 846 aaPredicted RBP20.99■□□□□ 0.95
HOXC11-201ENST00000243082 DTHD1Q6ZMT9 781 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 SIAH1Q8IUQ4 282 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 PYM1Q9BRP8 204 aaKnown RBP20.99■□□□□ 0.95
HOXC11-201ENST00000243082 KANSL2Q9H9L4 492 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 SPTLC3Q9NUV7 552 aa20.99■□□□□ 0.95
HOXC11-201ENST00000243082 BIN2Q9UBW5 565 aaPredicted RBP20.99■□□□□ 0.95
HOXC11-201ENST00000243082 LAD1O00515 517 aa20.98■□□□□ 0.95
HOXC11-201ENST00000243082 VIL1P09327 827 aaKnown RBP20.98■□□□□ 0.95
HOXC11-201ENST00000243082 CDC25AP30304 524 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms