RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 MAP3K4Q9Y6R4 1608 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 TEX33O43247 280 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 GNA11P29992 359 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 ZNF131P52739 623 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 DRP2Q13474 957 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 CLUL1Q15846 466 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 FYB2Q5VWT5 728 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 NLRP14Q86W24 1093 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 TEX11Q8IYF3 940 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 TC2NQ8N9U0 490 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 ENGASEQ8NFI3 743 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 IP6K1Q92551 441 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 P3H4Q92791 437 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 AIFM3Q96NN9 605 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 HOMER2Q9NSB8 354 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 GJB4Q9NTQ9 266 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 LCMT1Q9UIC8 334 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 SRPRBQ9Y5M8 271 aaKnown RBP10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 TAF11Q15544 211 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 LETM2Q2VYF4 491 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 ANKRD42Q8N9B4 389 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 SPDL1Q96EA4 605 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 NHEJ1Q9H9Q4 299 aaPredicted RBP10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 PARP2Q9UGN5 583 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 HPCAL4Q9UM19 191 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 NOVA2Q9UNW9 492 aaKnown RBP10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 ATP6V0A2Q9Y487 856 aa10.53□□□□□ -0.72
NUDCD1-201ENST00000239690 MAGEB6P1A0A0J9YX57 407 aa10.52□□□□□ -0.72
NUDCD1-201ENST00000239690 KCNQ3O43525 872 aa10.52□□□□□ -0.72
NUDCD1-201ENST00000239690 IFNAR2P48551 515 aa10.52□□□□□ -0.72
NUDCD1-201ENST00000239690 RASSF7Q02833 373 aa10.52□□□□□ -0.72
NUDCD1-201ENST00000239690 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.72
NUDCD1-201ENST00000239690 PACS2Q86VP3 889 aa10.52□□□□□ -0.72
NUDCD1-201ENST00000239690 ARHGAP24Q8N264 748 aa10.52□□□□□ -0.72
NUDCD1-201ENST00000239690 TPX2Q9ULW0 747 aaKnown RBP10.52□□□□□ -0.72
NUDCD1-201ENST00000239690 hCG_1642624A0A1W2PR95 340 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 GMNCA6NCL1 334 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 PPP1R37O75864 691 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 PTPREP23469 700 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 MYO1EQ12965 1108 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 PTGDRQ13258 359 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 TBC1D1Q86TI0 1168 aaPredicted RBP10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 CCDC65Q8IXS2 484 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 FANCBQ8NB91 859 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 LRRN4CLQ8ND94 238 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 EEF2KMTQ96G04 330 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 ARMT1Q9H993 441 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.52□□□□□ -0.731e-6■■■■■ 113.1
NUDCD1-201ENST00000239690 CIB2O75838 187 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 SUGP1Q8IWZ8 645 aaKnown RBP10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 VPS52Q8N1B4 723 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 MSANTD4Q8NCY6 345 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 ERMNQ8TAM6 284 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 TMOD3Q9NYL9 352 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 DONSONQ9NYP3 566 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 HDAC6Q9UBN7 1215 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 KIF1BO60333 1816 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 CROCC2H7BZ55 1655 aa10.52□□□□□ -0.73
NUDCD1-201ENST00000239690 UNC13BO14795 1591 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 SASH3O75995 380 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 MOCS3O95396 460 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 FAM133BQ5BKY9 247 aaKnown RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 DCAF17Q5H9S7 520 aaPredicted RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 ZNF658Q5TYW1 1059 aaPredicted RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 RASIP1Q5U651 963 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 CCDC174Q6PII3 467 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 ZNF365Q70YC5 407 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 RASGRP2Q7LDG7 609 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 PPP1R14CQ8TAE6 165 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 CNOT6LQ96LI5 555 aaKnown RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 PNKPQ96T60 521 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 TSC22D3Q99576 134 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 SH3GL3Q99963 347 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 GPHNQ9NQX3 736 aaPredicted RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 TUBE1Q9UJT0 475 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 IQSEC3Q9UPP2 1182 aaPredicted RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 ZNF532Q9HCE3 1301 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 MMP1P03956 469 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 TCP11X2Q5H9J9 407 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 RSRC2Q7L4I2 434 aaKnown RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 RPUSD2Q8IZ73 545 aaKnown RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 SYCP3Q8IZU3 236 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 CMTR1Q8N1G2 835 aaKnown RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 UBL4BQ8N7F7 174 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 NOA1Q8NC60 698 aaKnown RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 TEX13AQ9BXU3 409 aaPredicted RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 PRDM11Q9NQV5 511 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 AMFRQ9UKV5 643 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 RPL13P26373 211 aaKnown RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 BIRC3Q13489 604 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 SH2D4BQ5SQS7 431 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 GSTA5Q7RTV2 222 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 CABP7Q86V35 215 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 BATF3Q9NR55 127 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 FAM114A2Q9NRY5 505 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 PLAAQ9Y263 795 aa10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 VIRMAQ69YN4 1812 aaKnown RBP10.51□□□□□ -0.73
NUDCD1-201ENST00000239690 CAPRIN2Q6IMN6 1127 aaKnown RBP10.5□□□□□ -0.73
NUDCD1-201ENST00000239690 CCNI2Q6ZMN8 369 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms