RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 PNMA8AQ86V59 439 aaPredicted RBP12.23□□□□□ -0.45
CCDC170-201ENST00000239374 CNOT6LQ96LI5 555 aaKnown RBP12.23□□□□□ -0.45
CCDC170-201ENST00000239374 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 TBC1D7Q9P0N9 293 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 HDAC6Q9UBN7 1215 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 TMEM110-MUSTN1A8MSY1 372 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 EEF1GP26641 437 aaKnown RBP12.23□□□□□ -0.45
CCDC170-201ENST00000239374 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 CETN1Q12798 172 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 NONOQ15233 471 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCDC170-201ENST00000239374 OXER1Q8TDS5 423 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
CCDC170-201ENST00000239374 OVOS2A0A0J9YW53 1432 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 OVOS2Q6IE36 1432 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 ASIC2Q16515 512 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 TCP11X2Q5H9J9 407 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 PAIP2Q9BPZ3 127 aaKnown RBP12.23□□□□□ -0.45
CCDC170-201ENST00000239374 SUGCTQ9HAC7 445 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 SLC39A2Q9NP94 309 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 DENND2AQ9ULE3 1009 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 GDAQ9Y2T3 454 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 UBN2Q6ZU65 1347 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 TADA2BQ86TJ2 420 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 NELFCDQ8IXH7 590 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 TBC1D5Q92609 795 aa12.23□□□□□ -0.45
CCDC170-201ENST00000239374 DLC1Q96QB1 1528 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 A0A1B0GUA9 196 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 CTNNA1P35221 906 aaKnown RBP12.22□□□□□ -0.45
CCDC170-201ENST00000239374 GGCXP38435 758 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 SYCP3Q8IZU3 236 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 RASGRP4Q8TDF6 673 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 EPHB4P54760 987 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 TFAP4Q01664 338 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 RASSF7Q02833 373 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 SNX29Q8TEQ0 813 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 RSRC1Q96IZ7 334 aaKnown RBP12.22□□□□□ -0.45
CCDC170-201ENST00000239374 CCDC172P0C7W6 258 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 LONP1P36776 959 aaKnown RBP12.22□□□□□ -0.45
CCDC170-201ENST00000239374 CLNS1AP54105 237 aaKnown RBP12.22□□□□□ -0.45
CCDC170-201ENST00000239374 IFT88Q13099 833 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 SCARF1Q14162 830 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 UIMC1Q96RL1 719 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 NHEJ1Q9H9Q4 299 aaPredicted RBP12.22□□□□□ -0.45
CCDC170-201ENST00000239374 NEDD4P46934 1319 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 KCNK3O14649 394 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 RAD9BQ6WBX8 426 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 CCDC65Q8IXS2 484 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 STRBPQ96SI9 672 aaKnown RBP12.22□□□□□ -0.45
CCDC170-201ENST00000239374 BAIAP2L1Q9UHR4 511 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 FAM184BQ9ULE4 1060 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 ERBB3P21860 1342 aa12.22□□□□□ -0.45
CCDC170-201ENST00000239374 LCORLQ8N3X6 602 aa12.21□□□□□ -0.45
CCDC170-201ENST00000239374 ERMNQ8TAM6 284 aa12.21□□□□□ -0.45
CCDC170-201ENST00000239374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC170-201ENST00000239374 EPB41L5Q9HCM4 733 aa12.21□□□□□ -0.45
CCDC170-201ENST00000239374 FAM170AA1A519 330 aa12.21□□□□□ -0.45
CCDC170-201ENST00000239374 TECP42680 631 aa12.21□□□□□ -0.45
CCDC170-201ENST00000239374 DAAM2Q86T65 1068 aa12.21□□□□□ -0.45
CCDC170-201ENST00000239374 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.45
CCDC170-201ENST00000239374 ACSBG1Q96GR2 724 aa12.21□□□□□ -0.45
CCDC170-201ENST00000239374 HGSO14964 777 aaPredicted RBP12.21□□□□□ -0.46
CCDC170-201ENST00000239374 SEMA3EO15041 775 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 MOCS3O95396 460 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 CETN2P41208 172 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 EHHADHQ08426 723 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 FUT8Q9BYC5 575 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 STMN4Q9H169 189 aaPredicted RBP12.21□□□□□ -0.46
CCDC170-201ENST00000239374 KCNK9Q9NPC2 374 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 MTRF1LQ9UGC7 380 aaKnown RBP12.21□□□□□ -0.46
CCDC170-201ENST00000239374 UTP11Q9Y3A2 253 aaKnown RBP12.21□□□□□ -0.46
CCDC170-201ENST00000239374 CDC42BPGQ6DT37 1551 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 CUL4BQ13620 913 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 VWA3BQ502W6 1294 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 HERC4Q5GLZ8 1057 aaPredicted RBP12.21□□□□□ -0.46
CCDC170-201ENST00000239374 ATG9AQ7Z3C6 839 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 KRT25Q7Z3Z0 450 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 KRT12Q99456 494 aa12.21□□□□□ -0.46
CCDC170-201ENST00000239374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.46
CCDC170-201ENST00000239374 SAP30BPQ9UHR5 308 aaKnown RBP12.21□□□□□ -0.46
CCDC170-201ENST00000239374 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 CETN3O15182 167 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
CCDC170-201ENST00000239374 DEPDC5O75140 1603 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 HEXIM1O94992 359 aaKnown RBP12.2□□□□□ -0.46
CCDC170-201ENST00000239374 GSTO1P78417 241 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 ZBED6P86452 979 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 IQCDQ96DY2 449 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 LY9Q9HBG7 655 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 ZNF446Q9NWS9 450 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 FAM169AQ9Y6X4 670 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 A0A1W2PRG0 241 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 GYG1P46976 350 aa12.2□□□□□ -0.46
CCDC170-201ENST00000239374 COL9A3Q14050 684 aaPredicted RBP12.2□□□□□ -0.46
CCDC170-201ENST00000239374 RABL6Q3YEC7 729 aaPredicted RBP12.2□□□□□ -0.46
CCDC170-201ENST00000239374 NBPF5PQ86XG9 351 aaPredicted RBP12.2□□□□□ -0.46
CCDC170-201ENST00000239374 SPATS2Q86XZ4 545 aaKnown RBP12.2□□□□□ -0.46
CCDC170-201ENST00000239374 NLRP3Q96P20 1036 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms