RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 SSH1Q8WYL5 1049 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 BORCS6Q96GS4 357 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 ARPP21Q9UBL0 812 aaPredicted RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 FEM1BQ9UK73 627 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 MAGEB6P1A0A0J9YX57 407 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CAND2O75155 1236 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 ADAMTS4O75173 837 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 MCAMP43121 646 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TRIM32Q13049 653 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TMEM67Q5HYA8 995 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TMEM240Q5SV17 173 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 GJC2Q5T442 439 aaPredicted RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 SAMD3Q8N6K7 520 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 SH3RF3Q8TEJ3 882 aaPredicted RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 SLF1Q9BQI6 1058 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 FARP1Q9Y4F1 1045 aaPredicted RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 NCOR1O75376 2440 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 ZFYP08048 801 aaPredicted RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CYP2C19P33261 490 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TFCP2Q12800 502 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 RAB3GAP1Q15042 981 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TNNI3KQ59H18 835 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 HLA-CQ95604 372 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 GPHNQ9NQX3 736 aaPredicted RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 FPGT-TNNI3KV9GXZ4 949 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 PHIPQ8WWQ0 1821 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 MYH2Q9UKX2 1941 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 PQBP1O60828 265 aaKnown RBP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 RAB11FIP3O75154 756 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CPT1AP50416 773 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 GABPAQ06546 454 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 SLFN5Q08AF3 891 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CCL14Q16627 93 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 Q3C1V9 767 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 CCDC178Q5BJE1 867 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 NPLOC4Q8TAT6 608 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 SSH3Q8TE77 659 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 VTI1AQ96AJ9 217 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 AATFQ9NY61 560 aaKnown RBP eCLIP2.75□□□□□ -1.97
PRKD3-201ENST00000234179 LTBP2Q14767 1821 aa2.75□□□□□ -1.97
PRKD3-201ENST00000234179 TRIM43BA6NCK2 446 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 APBB1O00213 710 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 GDF11O95390 407 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ATP8B2P98198 1209 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 UBE3CQ15386 1083 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 C9orf50Q5SZB4 431 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 PPP2R2DQ66LE6 453 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 TRIM43Q96BQ3 446 aaPredicted RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 GPATCH3Q96I76 525 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ALPK3Q96L96 1907 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ACAD9Q9H845 621 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 BTBD7Q9P203 1132 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ZHX1Q9UKY1 873 aaPredicted RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 EMSYQ7Z589 1322 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF865P0CJ78 1059 aaPredicted RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ADORA1P30542 326 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 PTPN5P54829 565 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 RBL2Q08999 1139 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 GRIN2CQ14957 1233 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 LEXMQ3ZCV2 418 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 SBK1Q52WX2 424 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 FAM47AQ5JRC9 791 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 CLASRPQ8N2M8 674 aaKnown RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 AFAP1L1Q8TED9 768 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 KATNAL1Q9BW62 490 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 NACAP1Q9BZK3 213 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 HIPK3Q9H422 1215 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ABHD14A-ACY1A0A1B0GW23 586 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 BMP1P13497 986 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ATP2A2P16615 1042 aaKnown RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 IGFBP4P22692 258 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 SHMT1P34896 483 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 TIMM10P62072 90 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ACVR2BQ13705 512 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 PLS1Q14651 629 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ZKSCAN2Q63HK3 967 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 NFRKBQ6P4R8 1299 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 TEX2Q8IWB9 1127 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 FAM126BQ8IXS8 530 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 TRPV1Q8NER1 839 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 MTG1Q9BT17 334 aaPredicted RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 MPHOSPH10O00566 681 aaKnown RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 IDH1O75874 414 aaKnown RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 FAAP100Q0VG06 881 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 GNASQ5JWF2 1037 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF365Q70YC5 407 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ANKRD35Q8N283 1001 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ZNF579Q8NAF0 562 aaKnown RBP2.74□□□□□ -1.97
PRKD3-201ENST00000234179 RSPH1Q8WYR4 309 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 PBX4Q9BYU1 374 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 MCM9Q9NXL9 1143 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ZSWIM8A7E2V4 1837 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ZBED9Q6R2W3 1325 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 SYNRGQ9UMZ2 1314 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 PI4K2BG5E9Z4 385 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 VWA5AO00534 786 aa2.74□□□□□ -1.97
PRKD3-201ENST00000234179 ST18O60284 1047 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms