RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 POLR3GO15318 223 aaPredicted RBP16.22■□□□□ 0.19
PTK7-201ENST00000230418 ECM2O94769 699 aaPredicted RBP16.22■□□□□ 0.19
PTK7-201ENST00000230418 TMCO3Q6UWJ1 677 aa16.22■□□□□ 0.19
PTK7-201ENST00000230418 JDP2Q8WYK2 163 aa16.22■□□□□ 0.19
PTK7-201ENST00000230418 DPF2Q92785 391 aa16.22■□□□□ 0.19
PTK7-201ENST00000230418 TMEM260Q9NX78 707 aa16.22■□□□□ 0.19
PTK7-201ENST00000230418 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
PTK7-201ENST00000230418 HMGB2P26583 209 aaKnown RBP16.21■□□□□ 0.19
PTK7-201ENST00000230418 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
PTK7-201ENST00000230418 RPN1P04843 607 aaKnown RBP16.21■□□□□ 0.19
PTK7-201ENST00000230418 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
PTK7-201ENST00000230418 ELF2Q15723 593 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 NTRK3Q16288 839 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 SLFN13Q68D06 897 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 TIGD1Q96MW7 591 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 SLF1Q9BQI6 1058 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 FUCA2Q9BTY2 467 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 TDRD3Q9H7E2 651 aaKnown RBP16.21■□□□□ 0.19
PTK7-201ENST00000230418 POLD4Q9HCU8 107 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 GPS2Q13227 327 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 CUL4BQ13620 913 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 DLGAP5Q15398 846 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 STK36Q9NRP7 1315 aa16.21■□□□□ 0.19
PTK7-201ENST00000230418 MRC1P22897 1456 aa16.21■□□□□ 0.18
PTK7-201ENST00000230418 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 TBCAO75347 108 aaKnown RBP16.2■□□□□ 0.18
PTK7-201ENST00000230418 CYP4A11Q02928 519 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 TROAPQ12815 778 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 PFKFB3Q16875 520 aaPredicted RBP16.2■□□□□ 0.18
PTK7-201ENST00000230418 MIGA2Q7L4E1 593 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 CAPZA3Q96KX2 299 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 LZTS2Q9BRK4 669 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 CARD6Q9BX69 1037 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 FAM217BQ9NTX9 383 aaPredicted RBP16.2■□□□□ 0.18
PTK7-201ENST00000230418 IMPACTQ9P2X3 320 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 ZNF215Q9UL58 517 aaPredicted RBP16.2■□□□□ 0.18
PTK7-201ENST00000230418 AKR1B1P15121 316 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 MORC3Q14149 939 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 NAA30Q147X3 362 aaPredicted RBP16.2■□□□□ 0.18
PTK7-201ENST00000230418 PRR16Q569H4 304 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 HERC4Q5GLZ8 1057 aaPredicted RBP16.2■□□□□ 0.18
PTK7-201ENST00000230418 CSRNP1Q96S65 589 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 GYS1P13807 737 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 NBPF11Q86T75 865 aa16.2■□□□□ 0.18
PTK7-201ENST00000230418 FBXO2Q9UK22 296 aaPredicted RBP16.2■□□□□ 0.18
PTK7-201ENST00000230418 LRRC41Q15345 812 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 ZFYVE27Q5T4F4 411 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 PLA2G4DQ86XP0 818 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 HSP90B2PQ58FF3 399 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 CT47A1Q5JQC4 288 aaPredicted RBP16.19■□□□□ 0.18
PTK7-201ENST00000230418 FAM207AQ9NSI2 230 aaPredicted RBP16.19■□□□□ 0.18
PTK7-201ENST00000230418 VEGFAP15692 232 aaPredicted RBP16.19■□□□□ 0.18
PTK7-201ENST00000230418 USP8P40818 1118 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 AOC3Q16853 763 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 FAM114A1Q8IWE2 563 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 SYCP3Q8IZU3 236 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 POLLQ9UGP5 575 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 KCNJ18B7U540 433 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 FGFR1OPO95684 399 aaKnown RBP16.19■□□□□ 0.18
PTK7-201ENST00000230418 TTLL1O95922 423 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 CHMP4BP1P59074 171 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 KCNJ12Q14500 433 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.189e-7■■□□□ 13.6
PTK7-201ENST00000230418 PCDHA12Q9UN75 941 aa16.19■□□□□ 0.18
PTK7-201ENST00000230418 MACROD2A1Z1Q3 448 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 SLURP2P0DP57 97 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 TOB1P50616 345 aaPredicted RBP16.18■□□□□ 0.18
PTK7-201ENST00000230418 EARS2Q5JPH6 523 aaKnown RBP16.18■□□□□ 0.18
PTK7-201ENST00000230418 SPATA1Q5VX52 437 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 CERS3Q8IU89 383 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 ERMNQ8TAM6 284 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 DAGLAQ9Y4D2 1042 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 ERICH4A6NGS2 130 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 GTPBP6O43824 516 aaPredicted RBP16.18■□□□□ 0.18
PTK7-201ENST00000230418 NPR1P16066 1061 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 TMEM132AQ24JP5 1023 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 COA1Q9GZY4 146 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 TRIM49BA6NDI0 452 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 ORC4O43929 436 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 RXRBP28702 533 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 CASP14P31944 242 aa16.18■□□□□ 0.18
PTK7-201ENST00000230418 USP17L15C9J2P7 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L13C9JLJ4 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L11C9JVI0 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L18D6R9N7 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L22D6RA61 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L17D6RBQ6 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L19D6RCP7 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L20D6RJB6 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 ARHGAP6O43182 974 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 PLCG1P19174 1290 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L24Q0WX57 530 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 ABCB5Q2M3G0 1257 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 DCAF17Q5H9S7 520 aaPredicted RBP16.17■□□□□ 0.18
PTK7-201ENST00000230418 USP17L6PQ6QN14 398 aa16.17■□□□□ 0.18
PTK7-201ENST00000230418 CNGA4Q8IV77 575 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms