RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 TAF11Q15544 211 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 ZNF710Q8N1W2 664 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 KLHL29Q96CT2 875 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 LSM14BQ9BX40 385 aaKnown RBP15.22■□□□□ 0.03
HCFC2-201ENST00000229330 MAN1B1Q9UKM7 699 aa15.22■□□□□ 0.03
HCFC2-201ENST00000229330 TRIM66O15016 1216 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 HSPD1P10809 573 aaKnown RBP15.21■□□□□ 0.03
HCFC2-201ENST00000229330 TXKP42681 527 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 CTDSPL2Q05D32 466 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 DYMQ7RTS9 669 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 SLC24A3Q9HC58 644 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 MCM9Q9NXL9 1143 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 TPTE2Q6XPS3 522 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 SDCCAG8Q86SQ7 713 aaPredicted RBP15.21■□□□□ 0.03
HCFC2-201ENST00000229330 FNBP4Q8N3X1 1017 aaPredicted RBP15.21■□□□□ 0.03
HCFC2-201ENST00000229330 ANKRD13CQ8N6S4 541 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
HCFC2-201ENST00000229330 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
HCFC2-201ENST00000229330 HSPA1LP34931 641 aa15.21■□□□□ 0.02
HCFC2-201ENST00000229330 TOGARAM2Q6ZUX3 1019 aa15.21■□□□□ 0.02
HCFC2-201ENST00000229330 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 BTBD18B2RXH4 712 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 PFDN1O60925 122 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 SLFN14P0C7P3 912 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 NAP1L4Q99733 375 aaKnown RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 EPC1Q9H2F5 836 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 I3L4J1 428 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 RPN1P04843 607 aaKnown RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 PDCLQ13371 301 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 EMBQ6PCB8 327 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 SAAL1Q96ER3 474 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 SAMSN1Q9NSI8 373 aaKnown RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 LRWD1Q9UFC0 647 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 HMGB1P1B2RPK0 211 aaPredicted RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 IFNAR2P48551 515 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 EIF4A1P60842 406 aaKnown RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 EHHADHQ08426 723 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 CCHCR1Q8TD31 782 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 KIFAP3Q92845 792 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 CNOT10Q9H9A5 744 aaKnown RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 VCX3AQ9NNX9 186 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 GCKRQ14397 625 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 CCDC13Q8IYE1 715 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 DDX27Q96GQ7 796 aaKnown RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 TPD52P55327 224 aaPredicted RBP15.2■□□□□ 0.02
HCFC2-201ENST00000229330 SLAIN2Q9P270 581 aa15.2■□□□□ 0.02
HCFC2-201ENST00000229330 HLA-DOAP06340 250 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 FAM133BQ5BKY9 247 aaKnown RBP15.19■□□□□ 0.02
HCFC2-201ENST00000229330 RNF14Q9UBS8 474 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 GNA14O95837 355 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 GGCXP38435 758 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 IRX4P78413 519 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 RASSF7Q02833 373 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 UHMK1Q8TAS1 419 aaKnown RBP15.19■□□□□ 0.02
HCFC2-201ENST00000229330 PGBD1Q96JS3 809 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 TADA3O75528 432 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 NDUFA10O95299 355 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 GAS8O95995 478 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 A1BGP04217 495 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 LRRC23Q53EV4 343 aaPredicted RBP15.19■□□□□ 0.02
HCFC2-201ENST00000229330 RPUSD2Q8IZ73 545 aaKnown RBP15.19■□□□□ 0.02
HCFC2-201ENST00000229330 NOP53Q9NZM5 478 aaKnown RBP15.19■□□□□ 0.02
HCFC2-201ENST00000229330 PLEKHG1Q9ULL1 1385 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 SLMAPQ14BN4 828 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 HERC4Q5GLZ8 1057 aaPredicted RBP15.19■□□□□ 0.02
HCFC2-201ENST00000229330 U2AF1L4Q8WU68 220 aaKnown RBP15.19■□□□□ 0.02
HCFC2-201ENST00000229330 SYMPKQ92797 1274 aaKnown RBP15.19■□□□□ 0.02
HCFC2-201ENST00000229330 HAUS7Q99871 368 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
HCFC2-201ENST00000229330 WHAMMQ8TF30 809 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
HCFC2-201ENST00000229330 BPIFA3Q9BQP9 254 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 CDCA7Q9BWT1 371 aaPredicted RBP15.18■□□□□ 0.02
HCFC2-201ENST00000229330 BAG2O95816 211 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 PARP1P09874 1014 aaKnown RBP15.18■□□□□ 0.02
HCFC2-201ENST00000229330 NBPF9Q3BBW0 867 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 SNX29Q8TEQ0 813 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 MAIP1Q8WWC4 291 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 HECW2Q9P2P5 1572 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 hCG_1642624A0A1W2PR95 340 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 TBC1D8O95759 1140 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 CYP21A2P08686 494 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 NONOQ15233 471 aaKnown RBP eCLIP15.18■□□□□ 0.02
HCFC2-201ENST00000229330 RABGAP1Q9Y3P9 1069 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 EEF1GP26641 437 aaKnown RBP15.18■□□□□ 0.02
HCFC2-201ENST00000229330 GBP7Q8N8V2 638 aaPredicted RBP15.18■□□□□ 0.02
HCFC2-201ENST00000229330 ZNF594Q96JF6 807 aaPredicted RBP15.18■□□□□ 0.02
HCFC2-201ENST00000229330 TSC22D3Q99576 134 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 TUBGCP2Q9BSJ2 902 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 IMPG2Q9BZV3 1241 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 SCOCQ9UIL1 159 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 PRDM4Q9UKN5 801 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 MRFAP1Q9Y605 127 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 EVI5O60447 810 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 ZAP70P43403 619 aa15.18■□□□□ 0.02
HCFC2-201ENST00000229330 KIF23Q02241 960 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms