RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 KIF1BPQ96EK5 621 aa13.95□□□□□ -0.18
FRG1-201ENST00000226798 RNPC3Q96LT9 517 aaKnown RBP13.95□□□□□ -0.18
FRG1-201ENST00000226798 PPP1R9AQ9ULJ8 1098 aa13.95□□□□□ -0.18
FRG1-201ENST00000226798 MYH4Q9Y623 1939 aa13.95□□□□□ -0.18
FRG1-201ENST00000226798 PQBP1O60828 265 aaKnown RBP13.94□□□□□ -0.18
FRG1-201ENST00000226798 AKR1A1P14550 325 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 COPB2P35606 906 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 STAT3P40763 770 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 KCTD2Q14681 263 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 ANKRD33Q7Z3H0 272 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 PANK1Q8TE04 598 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 TOX2Q96NM4 488 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 KANSL2Q9H9L4 492 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 PAG1Q9NWQ8 432 aa13.94□□□□□ -0.18
FRG1-201ENST00000226798 SYNRGQ9UMZ2 1314 aa13.93□□□□□ -0.18
FRG1-201ENST00000226798 USP17L12C9JPN9 530 aa13.93□□□□□ -0.18
FRG1-201ENST00000226798 USP17L21D6R901 530 aa13.93□□□□□ -0.18
FRG1-201ENST00000226798 IFIT2P09913 472 aaKnown RBP13.93□□□□□ -0.18
FRG1-201ENST00000226798 RAG1P15918 1043 aa13.93□□□□□ -0.18
FRG1-201ENST00000226798 FPGSQ05932 587 aa13.93□□□□□ -0.18
FRG1-201ENST00000226798 FAAP100Q0VG06 881 aa13.93□□□□□ -0.18
FRG1-201ENST00000226798 MSL3Q8N5Y2 521 aaKnown RBP13.93□□□□□ -0.18
FRG1-201ENST00000226798 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
FRG1-201ENST00000226798 TSEN34Q9BSV6 310 aaKnown RBP13.93□□□□□ -0.18
FRG1-201ENST00000226798 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.93□□□□□ -0.18
FRG1-201ENST00000226798 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
FRG1-201ENST00000226798 SYNGAP1Q96PV0 1343 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 ATMINO43313 823 aaPredicted RBP13.92□□□□□ -0.18
FRG1-201ENST00000226798 CHGBP05060 677 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 C7P10643 843 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 ACLYP53396 1101 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 FAM83BQ5T0W9 1011 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 CCSAPQ6IQ19 270 aaPredicted RBP13.92□□□□□ -0.18
FRG1-201ENST00000226798 SIRT2Q8IXJ6 389 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 AMOTL1Q8IY63 956 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 KLHDC9Q8NEP7 349 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.92□□□□□ -0.18
FRG1-201ENST00000226798 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
FRG1-201ENST00000226798 TMEM39AQ9NV64 488 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 TBX21Q9UL17 535 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 CNPY2Q9Y2B0 182 aa13.92□□□□□ -0.18
FRG1-201ENST00000226798 MYO9BQ13459 2157 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 LRRC37A2A6NM11 1700 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 DNAJC25-GNG10A0A024R161 153 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 MOXD2PA6NHM9 499 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 APBB1O00213 710 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 ATP5JP18859 108 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 DNAJB2P25686 324 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 UBE3CQ15386 1083 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 CTR9Q6PD62 1173 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 MAMDC4Q6UXC1 1216 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 HAUS7Q99871 368 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 TEX13BQ9BXU2 312 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 BOLA2Q9H3K6 86 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 PRDM6Q9NQX0 595 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 STARD7Q9NQZ5 370 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 GBF1Q92538 1859 aa13.91□□□□□ -0.18
FRG1-201ENST00000226798 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
FRG1-201ENST00000226798 CST5P28325 142 aaPredicted RBP13.9□□□□□ -0.18
FRG1-201ENST00000226798 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.9□□□□□ -0.18
FRG1-201ENST00000226798 RPAP2Q8IXW5 612 aaPredicted RBP13.9□□□□□ -0.18
FRG1-201ENST00000226798 USP38Q8NB14 1042 aa13.9□□□□□ -0.18
FRG1-201ENST00000226798 NUP133Q8WUM0 1156 aa13.9□□□□□ -0.18
FRG1-201ENST00000226798 SLF1Q9BQI6 1058 aa13.9□□□□□ -0.18
FRG1-201ENST00000226798 RIPK3Q9Y572 518 aa13.9□□□□□ -0.18
FRG1-201ENST00000226798 SLC4A4Q9Y6R1 1079 aa13.9□□□□□ -0.18
FRG1-201ENST00000226798 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 MYADML2A6NDP7 307 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 DCDC2CA8MYV0 355 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 ATP2A1O14983 1001 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 ADCY6O43306 1168 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 HMMRO75330 724 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 TIMP1P01033 207 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 HNRNPUQ00839 825 aaKnown RBP eCLIP13.89□□□□□ -0.19
FRG1-201ENST00000226798 KCNA10Q16322 511 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 SNRNP48Q6IEG0 339 aaKnown RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 ZNF467Q7Z7K2 595 aaPredicted RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 SYMPKQ92797 1274 aaKnown RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 DDRGK1Q96HY6 314 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 NUP88Q99567 741 aaPredicted RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
FRG1-201ENST00000226798 PUS7LQ9H0K6 701 aaKnown RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 ARPP21Q9UBL0 812 aaPredicted RBP13.89□□□□□ -0.19
FRG1-201ENST00000226798 FAM184BQ9ULE4 1060 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 ELP1O95163 1332 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
FRG1-201ENST00000226798 NDUFB10O96000 172 aa13.88□□□□□ -0.19
FRG1-201ENST00000226798 RASA1P20936 1047 aa13.88□□□□□ -0.19
FRG1-201ENST00000226798 CDK7P50613 346 aa13.88□□□□□ -0.19
FRG1-201ENST00000226798 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
FRG1-201ENST00000226798 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
FRG1-201ENST00000226798 TIFAQ96CG3 184 aa13.88□□□□□ -0.19
FRG1-201ENST00000226798 FGD4Q96M96 766 aa13.88□□□□□ -0.19
FRG1-201ENST00000226798 UPF3AQ9H1J1 476 aaKnown RBP13.88□□□□□ -0.19
FRG1-201ENST00000226798 ZNF576Q9H609 170 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms