RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 TRIM66O15016 1216 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 CTIFO43310 598 aaKnown RBP15.27■□□□□ 0.03
NFKB1-201ENST00000226574 NF2P35240 595 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 TCP10Q12799 353 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 TFR2Q9UP52 801 aa15.27■□□□□ 0.03
NFKB1-201ENST00000226574 SHROOM2Q13796 1616 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 UBN2Q6ZU65 1347 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 BUB1BO60566 1050 aaPredicted RBP15.26■□□□□ 0.03
NFKB1-201ENST00000226574 CTNNA2P26232 953 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 TUBB2AQ13885 445 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 MSL1Q68DK7 614 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 GBP6Q6ZN66 633 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 ARFGAP2Q8N6H7 521 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 ERMNQ8TAM6 284 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 TBC1D5Q92609 795 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 DYNLL2Q96FJ2 89 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 TUBB2BQ9BVA1 445 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 A0A1W2PRG0 241 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 CETN3O15182 167 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 CIAO1O76071 339 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 PPFIA1Q13136 1202 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 ARHGAP44Q17R89 818 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 USH1GQ495M9 461 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 CCDC65Q8IXS2 484 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 LRRC47Q8N1G4 583 aaKnown RBP15.26■□□□□ 0.03
NFKB1-201ENST00000226574 NUP58Q9BVL2 599 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 CAPS2Q9BXY5 557 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 TSGA10Q9BZW7 698 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 A2ML1A8K2U0 1454 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 MAP3K15Q6ZN16 1313 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 ALKQ9UM73 1620 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 FAM13AO94988 1023 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 RPS8P62241 208 aaKnown RBP15.26■□□□□ 0.03
NFKB1-201ENST00000226574 GSTO1P78417 241 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 RIN2Q8WYP3 895 aaPredicted RBP15.26■□□□□ 0.03
NFKB1-201ENST00000226574 TMOD2Q9NZR1 351 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 SERPINA10Q9UK55 444 aa15.26■□□□□ 0.03
NFKB1-201ENST00000226574 MFAP3LO75121 409 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 TADA3O75528 432 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 FTCDO95954 541 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 PLCB3Q01970 1234 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 RPS6KA1Q15418 735 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 ZYXQ15942 572 aaKnown RBP15.25■□□□□ 0.03
NFKB1-201ENST00000226574 HS2ST1Q7LGA3 356 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 CCDC84Q86UT8 332 aaPredicted RBP15.25■□□□□ 0.03
NFKB1-201ENST00000226574 SLF2Q8IX21 1173 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 ADGRG1Q9Y653 693 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 MOCS3O95396 460 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 TSGA10IPQ3SY00 556 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 RNF26Q9BY78 433 aaPredicted RBP15.25■□□□□ 0.03
NFKB1-201ENST00000226574 CCDC87Q9NVE4 849 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 NEO1Q92859 1461 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 USP17L8P0C7I0 530 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 FNBP4Q8N3X1 1017 aaPredicted RBP15.25■□□□□ 0.03
NFKB1-201ENST00000226574 ENGASEQ8NFI3 743 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 TRIM58Q8NG06 486 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 FAM71BQ8TC56 605 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 CHP1Q99653 195 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 LSM14BQ9BX40 385 aaKnown RBP15.25■□□□□ 0.03
NFKB1-201ENST00000226574 MRPL44Q9H9J2 332 aaKnown RBP15.25■□□□□ 0.03
NFKB1-201ENST00000226574 PTPRMP28827 1452 aa15.25■□□□□ 0.03
NFKB1-201ENST00000226574 UFL1O94874 794 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 FOXO4P98177 505 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 ASIC2Q16515 512 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 SFMBT2Q5VUG0 894 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 MGARPQ8TDB4 240 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 KRT12Q99456 494 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 ZC3H12CQ9C0D7 883 aaKnown RBP15.24■□□□□ 0.03
NFKB1-201ENST00000226574 KANSL2Q9H9L4 492 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 TRIM10Q9UDY6 481 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 MKRN1Q9UHC7 482 aaKnown RBP15.24■□□□□ 0.03
NFKB1-201ENST00000226574 KIF4AO95239 1232 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 CYP2D6P10635 497 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 EEF2P13639 858 aaKnown RBP15.24■□□□□ 0.03
NFKB1-201ENST00000226574 LIFRP42702 1097 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 CYP4A11Q02928 519 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 PEX26Q7Z412 305 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 EPB41L5Q9HCM4 733 aa15.24■□□□□ 0.03
NFKB1-201ENST00000226574 MRPL12P52815 198 aaKnown RBP15.23■□□□□ 0.03
NFKB1-201ENST00000226574 VSNL1P62760 191 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 USPL1Q5W0Q7 1092 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 EYA3Q99504 573 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 LY9Q9HBG7 655 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 MYO3AQ8NEV4 1616 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 MROH7-TTC4A0A0A0MT08 1334 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 USP17L3A6NCW0 530 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 USP17L4A6NCW7 530 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 CETN2P41208 172 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 VPS41P49754 854 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 PAK2Q13177 524 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 NAA25Q14CX7 972 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 USP17L1Q7RTZ2 530 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 KRT26Q7Z3Y9 468 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 ZNF804AQ7Z570 1209 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 PIGBQ92521 554 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 ADGRB3O60242 1522 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 ESYT3A0FGR9 886 aa15.23■□□□□ 0.03
NFKB1-201ENST00000226574 DDX39AO00148 427 aaKnown RBP15.23■□□□□ 0.03
NFKB1-201ENST00000226574 ANTXR2P58335 489 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms