RNA–Protein interactions for RNA: ENST00000226524.3

PF4V1-201, Transcript of platelet factor 4 variant 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4V1, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1-201ENST00000226524 SLC1A4P43007 532 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 FXR1P51114 621 aaKnown RBP eCLIP12.74□□□□□ -0.37
PF4V1-201ENST00000226524 TKFCQ3LXA3 575 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 RCSD1Q6JBY9 416 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 RILPL2Q969X0 211 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 TINF2Q9BSI4 451 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 SENP6Q9GZR1 1112 aaPredicted RBP12.74□□□□□ -0.37
PF4V1-201ENST00000226524 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
PF4V1-201ENST00000226524 FBXO28Q9NVF7 368 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
PF4V1-201ENST00000226524 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 RLFQ13129 1914 aa12.74□□□□□ -0.37
PF4V1-201ENST00000226524 ORC4O43929 436 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 RANBP6O60518 1105 aaKnown RBP12.73□□□□□ -0.37
PF4V1-201ENST00000226524 IGHA2P01877 340 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 AKR1A1P14550 325 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 MNX1P50219 401 aaPredicted RBP12.73□□□□□ -0.37
PF4V1-201ENST00000226524 ZNF792Q3KQV3 632 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
PF4V1-201ENST00000226524 ZNF467Q7Z7K2 595 aaPredicted RBP12.73□□□□□ -0.37
PF4V1-201ENST00000226524 RNF180Q86T96 592 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 CPXCR1Q8N123 301 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 ANKRD35Q8N283 1001 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 STAG1Q8WVM7 1258 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 LBHD1Q9BQE6 289 aaPredicted RBP12.73□□□□□ -0.37
PF4V1-201ENST00000226524 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 TOMM22Q9NS69 142 aa12.73□□□□□ -0.37
PF4V1-201ENST00000226524 PFASO15067 1338 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 SYNGAP1Q96PV0 1343 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 FAM47AQ5JRC9 791 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 LRRC47Q8N1G4 583 aaKnown RBP12.72□□□□□ -0.37
PF4V1-201ENST00000226524 REPS2Q8NFH8 660 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 TTC14Q96N46 770 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 NUP88Q99567 741 aaPredicted RBP12.72□□□□□ -0.37
PF4V1-201ENST00000226524 PRO3102Q9H379 93 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.72□□□□□ -0.37
PF4V1-201ENST00000226524 MYH4Q9Y623 1939 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 PARP14Q460N5 1801 aa12.72□□□□□ -0.37
PF4V1-201ENST00000226524 CCDC171Q6TFL3 1326 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 FGRP09769 529 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 SLC4A3P48751 1232 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 NUCB1Q02818 461 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 B4GALNT3Q6L9W6 998 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 DCAF4Q8WV16 495 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 GDF15Q99988 308 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 ACAD9Q9H845 621 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 TCP11L1Q9NUJ3 509 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 FAM184BQ9ULE4 1060 aa12.71□□□□□ -0.37
PF4V1-201ENST00000226524 FGAP02671 866 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 MYCNP04198 464 aaPredicted RBP12.7□□□□□ -0.38
PF4V1-201ENST00000226524 PGK2P07205 417 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 HSPD1P10809 573 aaKnown RBP12.7□□□□□ -0.38
PF4V1-201ENST00000226524 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
PF4V1-201ENST00000226524 CTDSPL2Q05D32 466 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 CCDC129Q6ZRS4 1044 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 TRPV1Q8NER1 839 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 MPHOSPH6Q99547 160 aaKnown RBP12.7□□□□□ -0.38
PF4V1-201ENST00000226524 TSEN34Q9BSV6 310 aaKnown RBP12.7□□□□□ -0.38
PF4V1-201ENST00000226524 UBE2OQ9C0C9 1292 aaKnown RBP12.7□□□□□ -0.38
PF4V1-201ENST00000226524 ABHD16BQ9H3Z7 469 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
PF4V1-201ENST00000226524 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
PF4V1-201ENST00000226524 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
PF4V1-201ENST00000226524 COL11A1P12107 1806 aaPredicted RBP12.69□□□□□ -0.38
PF4V1-201ENST00000226524 CEP290O15078 2479 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 ASB14A6NK59 587 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 ZNF213O14771 459 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 SDSP20132 328 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 MCCP23508 829 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 LRRC26Q2I0M4 334 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 RRP12Q5JTH9 1297 aaKnown RBP12.69□□□□□ -0.38
PF4V1-201ENST00000226524 GJC2Q5T442 439 aaPredicted RBP12.69□□□□□ -0.38
PF4V1-201ENST00000226524 C1orf53Q5VUE5 145 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 ESR2Q92731 530 aa12.69□□□□□ -0.38
PF4V1-201ENST00000226524 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
PF4V1-201ENST00000226524 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 DNAJC25-GNG10A0A024R161 153 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 A0A0D9SFI3 127 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 MOXD2PA6NHM9 499 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 NOVP48745 357 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 NMIQ13287 307 aaPredicted RBP12.68□□□□□ -0.38
PF4V1-201ENST00000226524 LRRC41Q15345 812 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
PF4V1-201ENST00000226524 AKNAD1Q5T1N1 836 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms