RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 AOPEPQ8N6M6 819 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 SGIP1Q9BQI5 828 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 RNF26Q9BY78 433 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 KANSL2Q9H9L4 492 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 FZD1Q9UP38 647 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 ANGEL2Q5VTE6 544 aaKnown RBP13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 DPY19L2Q6NUT2 758 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 SH3BP5LQ7L8J4 393 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 ZNF397Q8NF99 534 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 IDI2Q9BXS1 227 aa13.33□□□□□ -0.28
TNFAIP1-201ENST00000226225 SCG2P13521 617 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 EPS15P42566 896 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 SNAP25P60880 206 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 MYSM1Q5VVJ2 828 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 SDF4Q9BRK5 362 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 CLSTN2Q9H4D0 955 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 KIF28PB7ZC32 967 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 MARCH6O60337 910 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 ENTPD3O75355 529 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 FGRP09769 529 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 KIF23Q02241 960 aaPredicted RBP13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 C9orf131Q5VYM1 1079 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 SLFN13Q68D06 897 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 PIGSQ96S52 555 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 CLIC4Q9Y696 253 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 ZNF541Q9H0D2 1346 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 CCDC194A0A1B0GVG4 234 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 VEGFAP15692 232 aaPredicted RBP13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 PIK3AP1Q6ZUJ8 805 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 PLA2G4DQ86XP0 818 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 MRIQ9BWK5 157 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 HACL1Q9UJ83 578 aa13.32□□□□□ -0.28
TNFAIP1-201ENST00000226225 CACNA1SQ13698 1873 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 KRT2P35908 639 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 HSP90AA4PQ58FG1 418 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 CCAR1Q8IX12 1150 aaKnown RBP13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 CCAR2Q8N163 923 aaKnown RBP13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 DEFB129Q9H1M3 183 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 VPS33BQ9H267 617 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 BRAPQ7Z569 592 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 DDX19AQ9NUU7 478 aaKnown RBP13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 CCDC66A2RUB6 948 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 SPECC1Q5M775 1068 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 NEK11Q8NG66 645 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 GGA3Q9NZ52 723 aa13.31□□□□□ -0.28
TNFAIP1-201ENST00000226225 SPTLC2O15270 562 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 GABPB1Q06547 395 aaPredicted RBP13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 GOLGA8FQ08AF8 430 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 GOLGA8DPQ0D2H9 430 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 TMEM179Q6ZVK1 233 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 FSIP1Q8NA03 581 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 COA7Q96BR5 231 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 TIGD1Q96MW7 591 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 GMLQ99445 158 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 ARHGEF10LQ9HCE6 1279 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 MYH7P12883 1935 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 TMEM232C9JQI7 657 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 ZNF174Q15697 407 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 USH1GQ495M9 461 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 ZNF408Q9H9D4 720 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 MYH2Q9UKX2 1941 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 MMP1P03956 469 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 GABPAQ06546 454 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 SNW1Q13573 536 aaKnown RBP13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 ANO1Q5XXA6 986 aa13.3□□□□□ -0.28
TNFAIP1-201ENST00000226225 F5H6K3 240 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 KLRC3Q07444 240 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 JAKMIP3Q5VZ66 844 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 PDILTQ8N807 584 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 UIMC1Q96RL1 719 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 MORC2Q9Y6X9 1032 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 DUOX1Q9NRD9 1551 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 COL11A2P13942 1736 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 A0A1B0GVL5 298 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 SLU7O95391 586 aaKnown RBP13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 RPS12P25398 132 aaKnown RBP13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 MCM7P33993 719 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 ECE1P42892 770 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 GRM4Q14833 912 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 CCDC34Q96HJ3 373 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 MAD2L2Q9UI95 211 aa13.29□□□□□ -0.28
TNFAIP1-201ENST00000226225 SEC31AO94979 1220 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms