RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 CATIPQ7Z7H3 387 aa13.96□□□□□ -0.18
NUP88-201ENST00000225696 RIOK1Q9BRS2 568 aaKnown RBP13.96□□□□□ -0.18
NUP88-201ENST00000225696 TSPYL1Q9H0U9 437 aa13.96□□□□□ -0.18
NUP88-201ENST00000225696 MYO1AQ9UBC5 1043 aa13.96□□□□□ -0.18
NUP88-201ENST00000225696 CNTNAP5Q8WYK1 1306 aa13.96□□□□□ -0.18
NUP88-201ENST00000225696 RTL9Q8NET4 1388 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 NUP98P52948 1817 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 PSMD14O00487 310 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 GYG1P46976 350 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 NAALADL2Q58DX5 795 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 FAM47AQ5JRC9 791 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 CCDC122Q5T0U0 273 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 BRINP3Q76B58 766 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 MB21D1Q8N884 522 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 OR8K1Q8NGG5 319 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 ZNF507Q8TCN5 953 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 RASGRP4Q8TDF6 673 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 MTA3Q9BTC8 594 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 MAGEB6P1A0A0J9YX57 407 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
NUP88-201ENST00000225696 MRPS25P82663 173 aaKnown RBP13.95□□□□□ -0.18
NUP88-201ENST00000225696 HSP90B2PQ58FF3 399 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 C4orf32Q8N8J7 132 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 ANAPC4Q9UJX5 808 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 HPCAL4Q9UM19 191 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 LRP5O75197 1615 aa13.95□□□□□ -0.18
NUP88-201ENST00000225696 FAM205AQ6ZU69 1335 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 ARAP2Q8WZ64 1704 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 RPS6KA5O75582 802 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 EVA1CP58658 441 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 CYP27A1Q02318 531 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 ADSSL1Q8N142 457 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 CCDC148Q8NFR7 591 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 SLAIN2Q9P270 581 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 SAR1BQ9Y6B6 198 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 DISP2A7MBM2 1401 aa13.94□□□□□ -0.18
NUP88-201ENST00000225696 COL1A1P02452 1464 aaPredicted RBP13.93□□□□□ -0.18
NUP88-201ENST00000225696 B4DLN1 442 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 AGPSO00116 658 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 NLRP5P59047 1200 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 CHRNDQ07001 517 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 SLC4A8Q2Y0W8 1093 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 GPIHBP1Q8IV16 184 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
NUP88-201ENST00000225696 LUC7L2Q9Y383 392 aaKnown RBP13.93□□□□□ -0.18
NUP88-201ENST00000225696 MYH13Q9UKX3 1938 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 LGALS16A8MUM7 142 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 BMP15O95972 392 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 GGCXP38435 758 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 AARSP49588 968 aaKnown RBP eCLIP13.93□□□□□ -0.18
NUP88-201ENST00000225696 SPAG1Q07617 926 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 PAPD7Q5XG87 772 aaKnown RBP13.93□□□□□ -0.18
NUP88-201ENST00000225696 CTR9Q6PD62 1173 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 SMCR8Q8TEV9 937 aaPredicted RBP13.93□□□□□ -0.18
NUP88-201ENST00000225696 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.18
NUP88-201ENST00000225696 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 LTBP4Q8N2S1 1624 aa13.93□□□□□ -0.18
NUP88-201ENST00000225696 NHSL1Q5SYE7 1610 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 CICQ96RK0 1608 aaPredicted RBP13.92□□□□□ -0.18
NUP88-201ENST00000225696 EIF3CLB5ME19 914 aaKnown RBP13.92□□□□□ -0.18
NUP88-201ENST00000225696 USP17L12C9JPN9 530 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 USP17L21D6R901 530 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 IVLP07476 585 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 NOP2P46087 812 aaKnown RBP13.92□□□□□ -0.18
NUP88-201ENST00000225696 TUBB4BP68371 445 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 TRIM14Q14142 442 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 EZH2Q15910 746 aaKnown RBP13.92□□□□□ -0.18
NUP88-201ENST00000225696 TYW1BQ6NUM6 668 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 PACS2Q86VP3 889 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 HDAC7Q8WUI4 952 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 JAKMIP2Q96AA8 810 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 EIF3CQ99613 913 aaKnown RBP13.92□□□□□ -0.18
NUP88-201ENST00000225696 TMEM60Q9H2L4 133 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 HAUS4Q9H6D7 363 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 BRMS1Q9HCU9 246 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 MED4Q9NPJ6 270 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 CAPN11Q9UMQ6 739 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 DUOX1Q9NRD9 1551 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 PLCH1Q4KWH8 1693 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 ANKRD36CQ5JPF3 1778 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 MACROD2A1Z1Q3 448 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 H7C1D1 291 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 ZNF263O14978 683 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 KLRC4O43908 158 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 CYP2D6P10635 497 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 SCG2P13521 617 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 STAT6P42226 847 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 C2orf54Q08AI8 447 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 KRT26Q7Z3Y9 468 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 COG1Q8WTW3 980 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 EHD4Q9H223 541 aa13.92□□□□□ -0.18
NUP88-201ENST00000225696 PLEKP08567 350 aaPredicted RBP13.91□□□□□ -0.18
NUP88-201ENST00000225696 IQCA1Q86XH1 822 aa13.91□□□□□ -0.18
NUP88-201ENST00000225696 ANKRD20A12PQ8NF67 263 aa13.91□□□□□ -0.18
NUP88-201ENST00000225696 TTYH3Q9C0H2 523 aa13.91□□□□□ -0.18
NUP88-201ENST00000225696 RBM28Q9NW13 759 aaKnown RBP13.91□□□□□ -0.18
NUP88-201ENST00000225696 ERVV-1B6SEH8 477 aa13.9□□□□□ -0.18
NUP88-201ENST00000225696 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms