RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 HOMER1Q86YM7 354 aa19.26■□□□□ 0.67
TVP23C-201ENST00000225576 ADGRF4Q8IZF3 695 aa19.26■□□□□ 0.67
TVP23C-201ENST00000225576 PNMA6FA0A0J9YX94 578 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 NR1I2O75469 434 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 BMP15O95972 392 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 YBX3P16989 372 aaKnown RBP eCLIP19.25■□□□□ 0.67
TVP23C-201ENST00000225576 NAPAP54920 295 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 CCDC73Q6ZRK6 1079 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 KCTD1Q719H9 257 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 APOBEC3FQ8IUX4 373 aaKnown RBP19.25■□□□□ 0.67
TVP23C-201ENST00000225576 MRPS27Q92552 414 aaKnown RBP19.25■□□□□ 0.67
TVP23C-201ENST00000225576 NUP62CLQ9H1M0 184 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 DEFB129Q9H1M3 183 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 GINM1Q9NU53 330 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 TMX2Q9Y320 296 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 PCDHB6Q9Y5E3 794 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 DICER1Q9UPY3 1922 aaKnown RBP19.25■□□□□ 0.67
TVP23C-201ENST00000225576 ASTN2O75129 1339 aaPredicted RBP19.25■□□□□ 0.67
TVP23C-201ENST00000225576 BAZ2BQ9UIF8 2168 aaKnown RBP19.25■□□□□ 0.67
TVP23C-201ENST00000225576 A0A1W2PRG0 241 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 TRIM75PA6NK02 468 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 PHF20L1A8MW92 1017 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 NDUFB10O96000 172 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 CMA1P23946 247 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 MARCKSP29966 332 aaPredicted RBP19.25■□□□□ 0.67
TVP23C-201ENST00000225576 GNA11P29992 359 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 FAM160A1Q05DH4 1040 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 FSIP1Q8NA03 581 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 ENGASEQ8NFI3 743 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 GOLPH3LQ9H4A5 285 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 C6orf50Q9HD87 102 aa19.25■□□□□ 0.67
TVP23C-201ENST00000225576 MYH4Q9Y623 1939 aa19.24■□□□□ 0.67
TVP23C-201ENST00000225576 FAM205CA6NFA0 338 aa19.24■□□□□ 0.67
TVP23C-201ENST00000225576 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
TVP23C-201ENST00000225576 CUTAO60888 179 aa19.24■□□□□ 0.67
TVP23C-201ENST00000225576 ASNSP08243 561 aa19.24■□□□□ 0.67
TVP23C-201ENST00000225576 MRE11P49959 708 aa19.24■□□□□ 0.67
TVP23C-201ENST00000225576 SNW1Q13573 536 aaKnown RBP19.24■□□□□ 0.67
TVP23C-201ENST00000225576 CLSTN2Q9H4D0 955 aa19.24■□□□□ 0.67
TVP23C-201ENST00000225576 RNF181Q9P0P0 153 aa19.24■□□□□ 0.67
TVP23C-201ENST00000225576 SMCO2A6NFE2 343 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 ZBTB5O15062 677 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 PPP1R18Q6NYC8 613 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 PIK3AP1Q6ZUJ8 805 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 KRI1Q8N9T8 703 aaKnown RBP19.23■□□□□ 0.67
TVP23C-201ENST00000225576 TRPM4Q8TD43 1214 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 HOOK2Q96ED9 719 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 SH2D4AQ9H788 454 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 PCDHA6Q9UN73 950 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 PCDHA8Q9Y5H6 950 aa19.23■□□□□ 0.67
TVP23C-201ENST00000225576 USP17L10C9JJH3 530 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 ADAMTS3O15072 1205 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 RAD21O60216 631 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 BMP3P12645 472 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 PTPREP23469 700 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 SLC16A2P36021 539 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 EPS15P42566 896 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 NOM1Q5C9Z4 860 aaKnown RBP19.22■□□□□ 0.67
TVP23C-201ENST00000225576 TTC38Q5R3I4 469 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 ANGEL2Q5VTE6 544 aaKnown RBP19.22■□□□□ 0.67
TVP23C-201ENST00000225576 BTNL9Q6UXG8 535 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 TNMDQ9H2S6 317 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 GRPEL1Q9HAV7 217 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 GOPCQ9HD26 462 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 SCAF8Q9UPN6 1271 aaKnown RBP19.22■□□□□ 0.67
TVP23C-201ENST00000225576 PPP2R3BQ9Y5P8 575 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 SBF1O95248 1867 aa19.22■□□□□ 0.67
TVP23C-201ENST00000225576 FAM237AA0A1B0GTK4 181 aa19.21■□□□□ 0.67
TVP23C-201ENST00000225576 CCDC194A0A1B0GVG4 234 aa19.21■□□□□ 0.67
TVP23C-201ENST00000225576 CTNND1O60716 968 aaKnown RBP19.21■□□□□ 0.67
TVP23C-201ENST00000225576 ATP2B1P20020 1258 aa19.21■□□□□ 0.67
TVP23C-201ENST00000225576 ECE1P42892 770 aa19.21■□□□□ 0.67
TVP23C-201ENST00000225576 MAP3K11Q16584 847 aa19.21■□□□□ 0.67
TVP23C-201ENST00000225576 DCAF15Q66K64 600 aa19.21■□□□□ 0.67
TVP23C-201ENST00000225576 RBM43Q6ZSC3 357 aaKnown RBP19.21■□□□□ 0.67
TVP23C-201ENST00000225576 FMR1NBQ8N0W7 255 aaPredicted RBP19.21■□□□□ 0.67
TVP23C-201ENST00000225576 ZNF579Q8NAF0 562 aaKnown RBP19.21■□□□□ 0.67
TVP23C-201ENST00000225576 ACER1Q8TDN7 264 aa19.21■□□□□ 0.67
TVP23C-201ENST00000225576 FBXO2Q9UK22 296 aaPredicted RBP19.21■□□□□ 0.67
TVP23C-201ENST00000225576 CTAGE5O15320 804 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 KINO60870 393 aaKnown RBP19.2■□□□□ 0.66
TVP23C-201ENST00000225576 DDNO94850 711 aaPredicted RBP19.2■□□□□ 0.66
TVP23C-201ENST00000225576 HIRAP54198 1017 aaPredicted RBP19.2■□□□□ 0.66
TVP23C-201ENST00000225576 C9orf131Q5VYM1 1079 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 KRT25Q7Z3Z0 450 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 TSPY26PQ9H489 355 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 VCPKMTQ9H867 229 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 SRPRBQ9Y5M8 271 aaKnown RBP19.2■□□□□ 0.66
TVP23C-201ENST00000225576 A0A1B0GVL5 298 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 NBPF12Q5TAG4 269 aaPredicted RBP19.2■□□□□ 0.66
TVP23C-201ENST00000225576 RESP18Q5W5W9 173 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 SHC4Q6S5L8 630 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 RASGRP4Q8TDF6 673 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 COA7Q96BR5 231 aa19.2■□□□□ 0.66
TVP23C-201ENST00000225576 TMEM232C9JQI7 657 aa19.19■□□□□ 0.66
TVP23C-201ENST00000225576 PPP1R11O60927 126 aaPredicted RBP19.19■□□□□ 0.66
TVP23C-201ENST00000225576 LMOD1P29536 600 aaPredicted RBP19.19■□□□□ 0.66
TVP23C-201ENST00000225576 NDUFA8P51970 172 aa19.19■□□□□ 0.66
TVP23C-201ENST00000225576 ZNF174Q15697 407 aa19.19■□□□□ 0.66
TVP23C-201ENST00000225576 CAMK4Q16566 473 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms