RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 MTMR7Q9Y216 660 aa19.2■□□□□ 0.66
LIM2-201ENST00000221973 TMX2Q9Y320 296 aa19.2■□□□□ 0.66
LIM2-201ENST00000221973 CCDC69A6NI79 296 aa19.19■□□□□ 0.66
LIM2-201ENST00000221973 LIFRP42702 1097 aa19.19■□□□□ 0.66
LIM2-201ENST00000221973 PABPC4Q13310 644 aaKnown RBP eCLIP19.19■□□□□ 0.66
LIM2-201ENST00000221973 TOB2Q14106 344 aaPredicted RBP19.19■□□□□ 0.66
LIM2-201ENST00000221973 P2RX7Q99572 595 aaKnown RBP19.19■□□□□ 0.66
LIM2-201ENST00000221973 LARP6Q9BRS8 491 aaKnown RBP19.19■□□□□ 0.66
LIM2-201ENST00000221973 KIAA1683Q9H0B3 1180 aa19.19■□□□□ 0.66
LIM2-201ENST00000221973 SH2D4AQ9H788 454 aa19.19■□□□□ 0.66
LIM2-201ENST00000221973 LAMA3Q16787 3333 aa19.19■□□□□ 0.66
LIM2-201ENST00000221973 GREB1LQ9C091 1923 aaPredicted RBP19.19■□□□□ 0.66
LIM2-201ENST00000221973 AK2P54819 239 aa19.18■□□□□ 0.66
LIM2-201ENST00000221973 APOBRQ0VD83 1088 aa19.18■□□□□ 0.66
LIM2-201ENST00000221973 TMTC2Q8N394 836 aa19.18■□□□□ 0.66
LIM2-201ENST00000221973 PNMA1Q8ND90 353 aa19.18■□□□□ 0.66
LIM2-201ENST00000221973 CRISPLD2Q9H0B8 497 aa19.18■□□□□ 0.66
LIM2-201ENST00000221973 GOPCQ9HD26 462 aa19.18■□□□□ 0.66
LIM2-201ENST00000221973 NAP1L2Q9ULW6 460 aaPredicted RBP19.18■□□□□ 0.66
LIM2-201ENST00000221973 C19orf81C9J6K1 198 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 F5H6K3 240 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 FARP2O94887 1054 aaPredicted RBP19.17■□□□□ 0.66
LIM2-201ENST00000221973 KLRC3Q07444 240 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 KIAA1755Q5JYT7 1200 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 USP17L2Q6R6M4 530 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 NOL8Q76FK4 1167 aaKnown RBP19.17■□□□□ 0.66
LIM2-201ENST00000221973 SPICE1Q8N0Z3 855 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 FBXL16Q8N461 479 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 DEFB118Q96PH6 123 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 AGXT2Q9BYV1 514 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 VCPKMTQ9H867 229 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 EMILIN3Q9NT22 766 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 BRPF3Q9ULD4 1205 aa19.17■□□□□ 0.66
LIM2-201ENST00000221973 KLF18A0A0U1RQI7 1052 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 NDUFB10O96000 172 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 USP14P54578 494 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 HERVK_113P62684 666 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 TRIM32Q13049 653 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 SLFN13Q68D06 897 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 CATIPQ7Z7H3 387 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 SGMS1Q86VZ5 419 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 RAB11FIP4Q86YS3 637 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 ZNF654Q8IZM8 581 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 DPF3Q92784 378 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 MYL10Q9BUA6 226 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 ALDH8A1Q9H2A2 487 aaPredicted RBP19.16■□□□□ 0.66
LIM2-201ENST00000221973 TMOD4Q9NZQ9 345 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 RBPJLQ9UBG7 517 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 SYNPO2Q9UMS6 1093 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 SLC12A7Q9Y666 1083 aa19.16■□□□□ 0.66
LIM2-201ENST00000221973 ST18O60284 1047 aa19.15■□□□□ 0.66
LIM2-201ENST00000221973 IRX3P78415 501 aaPredicted RBP19.15■□□□□ 0.66
LIM2-201ENST00000221973 ANKRD1Q15327 319 aa19.15■□□□□ 0.66
LIM2-201ENST00000221973 Q3C1V9 767 aa19.15■□□□□ 0.66
LIM2-201ENST00000221973 SYNE3Q6ZMZ3 975 aa19.15■□□□□ 0.66
LIM2-201ENST00000221973 RASGRP2Q7LDG7 609 aa19.15■□□□□ 0.66
LIM2-201ENST00000221973 GMCL1P1Q8NEA9 526 aa19.15■□□□□ 0.66
LIM2-201ENST00000221973 NUP133Q8WUM0 1156 aa19.15■□□□□ 0.66
LIM2-201ENST00000221973 ISY1Q9ULR0 285 aaKnown RBP19.15■□□□□ 0.66
LIM2-201ENST00000221973 APOA5Q6Q788 366 aa19.14■□□□□ 0.65
LIM2-201ENST00000221973 NUP88Q99567 741 aaPredicted RBP19.14■□□□□ 0.65
LIM2-201ENST00000221973 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.14■□□□□ 0.65
LIM2-201ENST00000221973 PRO3102Q9H379 93 aa19.14■□□□□ 0.65
LIM2-201ENST00000221973 DDAH1O94760 285 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 TFRCP02786 760 aaKnown RBP19.13■□□□□ 0.65
LIM2-201ENST00000221973 HMGCRP04035 888 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 PDHBP11177 359 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 RXRAP19793 462 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 CHRDL2Q6WN34 429 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 MICU3Q86XE3 530 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 CCDC144CPQ8IYA2 1237 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 TRIB2Q92519 343 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 LPAR1Q92633 364 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 C12orf42Q96LP6 360 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 HTATIP2Q9BUP3 242 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 TPCN1Q9ULQ1 816 aa19.13■□□□□ 0.65
LIM2-201ENST00000221973 ALPK3Q96L96 1907 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 FRMPD2Q68DX3 1309 aaPredicted RBP19.12■□□□□ 0.65
LIM2-201ENST00000221973 GOLGA8BA8MQT2 603 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 ZBTB43O43298 467 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 CD2BP2O95400 341 aaKnown RBP19.12■□□□□ 0.65
LIM2-201ENST00000221973 VCAM1P19320 739 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 SLC1A4P43007 532 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 MNX1P50219 401 aaPredicted RBP19.12■□□□□ 0.65
LIM2-201ENST00000221973 TROAPQ12815 778 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 CCDC96Q2M329 555 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 FAM83BQ5T0W9 1011 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 GPRC5AQ8NFJ5 357 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 DIS3LQ8TF46 1054 aaKnown RBP19.12■□□□□ 0.65
LIM2-201ENST00000221973 DCAF4Q8WV16 495 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 USP6NLQ92738 828 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 PORCNQ9H237 461 aa19.12■□□□□ 0.65
LIM2-201ENST00000221973 RBM27Q9P2N5 1060 aaKnown RBP19.12■□□□□ 0.65
LIM2-201ENST00000221973 CNMDO75829 334 aa19.11■□□□□ 0.65
LIM2-201ENST00000221973 CALM1P0DP23 149 aa19.11■□□□□ 0.65
LIM2-201ENST00000221973 CALM2P0DP24 149 aa19.11■□□□□ 0.65
LIM2-201ENST00000221973 CALM3P0DP25 149 aa19.11■□□□□ 0.65
LIM2-201ENST00000221973 BMP3P12645 472 aa19.11■□□□□ 0.65
LIM2-201ENST00000221973 CAPN2P17655 700 aa19.11■□□□□ 0.65
LIM2-201ENST00000221973 PDIA3P30101 505 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms