RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 XBP1P17861 261 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 CAP2P40123 477 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 TYRO3Q06418 890 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 GPR162Q16538 588 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 EARS2Q5JPH6 523 aaKnown RBP17.4■□□□□ 0.38
PAF1-201ENST00000221265 RBM43Q6ZSC3 357 aaKnown RBP17.4■□□□□ 0.38
PAF1-201ENST00000221265 NUP88Q99567 741 aaPredicted RBP17.4■□□□□ 0.38
PAF1-201ENST00000221265 RCOR1Q9UKL0 485 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 MRVI1Q9Y6F6 885 aa17.4■□□□□ 0.38
PAF1-201ENST00000221265 F5H6K3 240 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 KLRC3Q07444 240 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 SLFN13Q68D06 897 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 HEATR3Q7Z4Q2 680 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 CKAP2LQ8IYA6 745 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 BICD2Q8TD16 824 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
PAF1-201ENST00000221265 RIOX1Q9H6W3 641 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 RTEL1Q9NZ71 1219 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 FZD1Q9UP38 647 aa17.39■□□□□ 0.37
PAF1-201ENST00000221265 TOB1P50616 345 aaPredicted RBP17.38■□□□□ 0.37
PAF1-201ENST00000221265 KIAA1755Q5JYT7 1200 aa17.38■□□□□ 0.37
PAF1-201ENST00000221265 PPP4R3BQ5MIZ7 849 aa17.38■□□□□ 0.37
PAF1-201ENST00000221265 DLK2Q6UY11 383 aa17.38■□□□□ 0.37
PAF1-201ENST00000221265 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.38■□□□□ 0.37
PAF1-201ENST00000221265 STXBP3O00186 592 aa17.38■□□□□ 0.37
PAF1-201ENST00000221265 NDUFB10O96000 172 aa17.38■□□□□ 0.37
PAF1-201ENST00000221265 KRT2P35908 639 aa17.38■□□□□ 0.37
PAF1-201ENST00000221265 ATL3Q6DD88 541 aa17.38■□□□□ 0.37
PAF1-201ENST00000221265 ADGRF4Q8IZF3 695 aa17.38■□□□□ 0.37
PAF1-201ENST00000221265 GLIS2Q9BZE0 524 aaPredicted RBP17.38■□□□□ 0.37
PAF1-201ENST00000221265 SMARCA1P28370 1054 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 SLC1A4P43007 532 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 NLRP5P59047 1200 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 ANO1Q5XXA6 986 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 SPICE1Q8N0Z3 855 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 LINC00301Q8NCQ3 95 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 FAM200AQ8TCP9 573 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 TNFRSF25Q93038 417 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 RRP36Q96EU6 259 aaKnown RBP17.37■□□□□ 0.37
PAF1-201ENST00000221265 JMJD4Q9H9V9 463 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 POLR3EQ9NVU0 708 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 BARHL2Q9NY43 387 aa17.37■□□□□ 0.37
PAF1-201ENST00000221265 SMCHD1A6NHR9 2005 aa17.36■□□□□ 0.37
PAF1-201ENST00000221265 USP17L10C9JJH3 530 aa17.36■□□□□ 0.37
PAF1-201ENST00000221265 SF3A1Q15459 793 aaKnown RBP17.36■□□□□ 0.37
PAF1-201ENST00000221265 GPATCH4Q5T3I0 446 aaKnown RBP17.36■□□□□ 0.37
PAF1-201ENST00000221265 APOBEC3FQ8IUX4 373 aaKnown RBP17.36■□□□□ 0.37
PAF1-201ENST00000221265 GMCL1P1Q8NEA9 526 aa17.36■□□□□ 0.37
PAF1-201ENST00000221265 ZNF830Q96NB3 372 aaPredicted RBP17.36■□□□□ 0.37
PAF1-201ENST00000221265 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
PAF1-201ENST00000221265 INPP5BP32019 993 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 PLCB2Q00722 1185 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 STK38Q15208 465 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 RASGRP4Q8TDF6 673 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 DCAF4Q8WV16 495 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 SH3GLB2Q9NR46 395 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 SEC63Q9UGP8 760 aaKnown RBP17.35■□□□□ 0.37
PAF1-201ENST00000221265 WNT7AO00755 349 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 PPP1R11O60927 126 aaPredicted RBP17.35■□□□□ 0.37
PAF1-201ENST00000221265 ATP2B1P20020 1258 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 ME1P48163 572 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 ZYXQ15942 572 aaKnown RBP17.35■□□□□ 0.37
PAF1-201ENST00000221265 ARHGEF10LQ9HCE6 1279 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 ADARB2Q9NS39 739 aaKnown RBP17.35■□□□□ 0.37
PAF1-201ENST00000221265 TMX2Q9Y320 296 aa17.35■□□□□ 0.37
PAF1-201ENST00000221265 SSC5DA1L4H1 1573 aa17.34■□□□□ 0.37
PAF1-201ENST00000221265 PTPAQ15257 358 aa17.34■□□□□ 0.37
PAF1-201ENST00000221265 ANO6Q4KMQ2 910 aa17.34■□□□□ 0.37
PAF1-201ENST00000221265 COA7Q96BR5 231 aa17.34■□□□□ 0.37
PAF1-201ENST00000221265 GMCL1Q96IK5 515 aa17.34■□□□□ 0.37
PAF1-201ENST00000221265 PCDHA7Q9UN72 937 aa17.34■□□□□ 0.37
PAF1-201ENST00000221265 PCDHB6Q9Y5E3 794 aa17.34■□□□□ 0.37
PAF1-201ENST00000221265 SPTLC2O15270 562 aa17.33■□□□□ 0.37
PAF1-201ENST00000221265 YEATS4O95619 227 aa17.33■□□□□ 0.37
PAF1-201ENST00000221265 ASNSP08243 561 aa17.33■□□□□ 0.37
PAF1-201ENST00000221265 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.37
PAF1-201ENST00000221265 NAPAP54920 295 aa17.33■□□□□ 0.37
PAF1-201ENST00000221265 LUZP1Q86V48 1076 aa17.33■□□□□ 0.37
PAF1-201ENST00000221265 CCAR1Q8IX12 1150 aaKnown RBP17.33■□□□□ 0.37
PAF1-201ENST00000221265 CBX8Q9HC52 389 aa17.33■□□□□ 0.37
PAF1-201ENST00000221265 BRMS1Q9HCU9 246 aa17.33■□□□□ 0.37
PAF1-201ENST00000221265 DOCK1Q14185 1865 aa17.33■□□□□ 0.37
PAF1-201ENST00000221265 SNAP25P60880 206 aa17.33■□□□□ 0.36
PAF1-201ENST00000221265 SLC39A14Q15043 492 aa17.33■□□□□ 0.36
PAF1-201ENST00000221265 BLIDQ8IZY5 108 aa17.33■□□□□ 0.36
PAF1-201ENST00000221265 GOLPH3LQ9H4A5 285 aa17.33■□□□□ 0.36
PAF1-201ENST00000221265 TTC12Q9H892 705 aaPredicted RBP17.33■□□□□ 0.36
PAF1-201ENST00000221265 PCDHA4Q9UN74 947 aa17.33■□□□□ 0.36
PAF1-201ENST00000221265 TMEM232C9JQI7 657 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 M0R2N6 131 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 BMP3P12645 472 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 PIK3AP1Q6ZUJ8 805 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 MTMR8Q96EF0 704 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 PNMA6FA0A0J9YX94 578 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 CALML3P27482 149 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 DGKZQ13574 1117 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 RILPL1Q5EBL4 403 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 DPY19L2Q6NUT2 758 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
PAF1-201ENST00000221265 CCDC148Q8NFR7 591 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms