RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 FUT2Q10981 343 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 IKQ13123 557 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 GRM4Q14833 912 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 PTPAQ15257 358 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 TTC38Q5R3I4 469 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 SHC4Q6S5L8 630 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 C11orf57Q6ZUT1 292 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 RRP36Q96EU6 259 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 OSBPL5Q9H0X9 879 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 TDRD3Q9H7E2 651 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 TMOD2Q9NZR1 351 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 KIAA1468Q9P260 1216 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 POLR2DO15514 142 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 HHIPL2Q6UWX4 724 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 CCDC34Q96HJ3 373 aa10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 ZNF277Q9NRM2 450 aaPredicted RBP10.11□□□□□ -0.79
MTHFD1-201ENST00000216605 VWA3AA6NCI4 1184 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 SMTNL1A8MU46 457 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 AP5Z1O43299 807 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 GRIN1Q05586 938 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 EARS2Q5JPH6 523 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 EXOC8Q8IYI6 725 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 BLIDQ8IZY5 108 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 OGFOD1Q8N543 542 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 OTUD6BQ8N6M0 293 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 AOPEPQ8N6M6 819 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 CCDC148Q8NFR7 591 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 MAD2L2Q9UI95 211 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 NID2Q14112 1375 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 GOLGB1Q14789 3259 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 USP17L5A8MUK1 530 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 PTGS1P23219 599 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 TPM4P67936 248 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 PNOCQ13519 176 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 CCDC93Q567U6 631 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 APOBEC3HQ6NTF7 200 aaKnown RBP10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 DHX58Q96C10 678 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 CSRNP2Q9H175 543 aa10.1□□□□□ -0.79
MTHFD1-201ENST00000216605 DPEP1P16444 411 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 NT5C2P49902 561 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 CCDC186Q7Z3E2 898 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 ZFPM1Q8IX07 1006 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 TCP11L1Q9NUJ3 509 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 CLRN2A0PK11 232 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 TCP10L2B9ZVM9 353 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 CAVIN2O95810 425 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 TNNT1P13805 278 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 PTGDRQ13258 359 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 CFAP100Q494V2 611 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 LONRF3Q496Y0 759 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 DACT2Q5SW24 774 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 CCDC112Q8NEF3 446 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 VEZTQ9HBM0 779 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 SWAP70Q9UH65 585 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 TTLL1O95922 423 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 AFMP43652 599 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 CERKLQ49MI3 558 aaPredicted RBP10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 RESP18Q5W5W9 173 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 RBM43Q6ZSC3 357 aaKnown RBP10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 CCDC12Q8WUD4 166 aaPredicted RBP10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 PIGSQ96S52 555 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 MTMR4Q9NYA4 1195 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 SERTAD1Q9UHV2 236 aa10.09□□□□□ -0.79
MTHFD1-201ENST00000216605 ROBO3Q96MS0 1386 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 BMP15O95972 392 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 PTPREP23469 700 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 DPCR1Q3MIW9 517 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 WWC2Q6AWC2 1192 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 SHISA4Q96DD7 197 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 ZDHHC15Q96MV8 337 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 HDAC9Q9UKV0 1011 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 PCDHA4Q9UN74 947 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 ZBTB12Q9Y330 459 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 ANKRD31Q8N7Z5 1873 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 SMCO2A6NFE2 343 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 GDF11O95390 407 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 POLD1P28340 1107 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 NCBP1Q09161 790 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 INF2Q27J81 1249 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 RTKN2Q8IZC4 609 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 ANKS1AQ92625 1134 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 C16orf45Q96MC5 204 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 C6orf50Q9HD87 102 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 PI4KBQ9UBF8 816 aa10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 FEZ2Q9UHY8 353 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 FBXO2Q9UK22 296 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 SRPRBQ9Y5M8 271 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-201ENST00000216605 PALM3A6NDB9 673 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 CYTH3O43739 400 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 SLC16A2P36021 539 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 JAKMIP3Q5VZ66 844 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 KRBA2Q6ZNG9 492 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 USP49Q70CQ1 688 aa10.07□□□□□ -0.8
MTHFD1-201ENST00000216605 EPSTI1Q96J88 318 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms