RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 SSRP1Q08945 709 aaKnown RBP11.52□□□□□ -0.56
RTCB-201ENST00000216038 CCDC173Q0VFZ6 552 aa11.52□□□□□ -0.56
RTCB-201ENST00000216038 SKOR2Q2VWA4 1001 aaPredicted RBP11.52□□□□□ -0.56
RTCB-201ENST00000216038 ASPRV1Q53RT3 343 aa11.52□□□□□ -0.56
RTCB-201ENST00000216038 HS1BP3Q53T59 392 aa11.52□□□□□ -0.56
RTCB-201ENST00000216038 SMARCC2Q8TAQ2 1214 aa11.52□□□□□ -0.56
RTCB-201ENST00000216038 RBM46Q8TBY0 533 aaKnown RBP11.52□□□□□ -0.56
RTCB-201ENST00000216038 MAP3K14Q99558 947 aa11.52□□□□□ -0.56
RTCB-201ENST00000216038 TANGO6Q9C0B7 1094 aa11.52□□□□□ -0.56
RTCB-201ENST00000216038 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 CNTNAP5Q8WYK1 1306 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 CDKL5O76039 1030 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 PKP1Q13835 747 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 PPP2R5BQ15173 497 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 GPATCH4Q5T3I0 446 aaKnown RBP11.52□□□□□ -0.57
RTCB-201ENST00000216038 SAPCD2Q86UD0 394 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 ZSCAN30Q86W11 494 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 ADGRF4Q8IZF3 695 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 FAM184AQ8NB25 1140 aa11.52□□□□□ -0.57
RTCB-201ENST00000216038 LLPHQ9BRT6 129 aaKnown RBP11.52□□□□□ -0.57
RTCB-201ENST00000216038 FMNL1O95466 1100 aaPredicted RBP11.51□□□□□ -0.57
RTCB-201ENST00000216038 USP14P54578 494 aa11.51□□□□□ -0.57
RTCB-201ENST00000216038 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
RTCB-201ENST00000216038 FOXD4L5Q5VV16 416 aaPredicted RBP11.51□□□□□ -0.57
RTCB-201ENST00000216038 GADL1Q6ZQY3 521 aa11.51□□□□□ -0.57
RTCB-201ENST00000216038 TRIM22Q8IYM9 498 aa11.51□□□□□ -0.57
RTCB-201ENST00000216038 FOXD4L4Q8WXT5 416 aaPredicted RBP11.51□□□□□ -0.57
RTCB-201ENST00000216038 KIFC2Q96AC6 838 aa11.51□□□□□ -0.57
RTCB-201ENST00000216038 RPAP3Q9H6T3 665 aaPredicted RBP11.51□□□□□ -0.57
RTCB-201ENST00000216038 TMOD4Q9NZQ9 345 aa11.51□□□□□ -0.57
RTCB-201ENST00000216038 ABT1Q9ULW3 272 aaKnown RBP11.51□□□□□ -0.57
RTCB-201ENST00000216038 SYNPO2Q9UMS6 1093 aa11.51□□□□□ -0.57
RTCB-201ENST00000216038 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 GNAQP50148 359 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 ZNF157P51786 506 aaPredicted RBP11.5□□□□□ -0.57
RTCB-201ENST00000216038 STAT2P52630 851 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 AKAP17AQ02040 695 aaKnown RBP11.5□□□□□ -0.57
RTCB-201ENST00000216038 GUCY1B3Q02153 619 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 GRM1Q13255 1194 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 PPIL2Q13356 520 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 OTUD7BQ6GQQ9 843 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 LPAR1Q92633 364 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 PIGSQ96S52 555 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 PPP1R9BQ96SB3 815 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 JMJD4Q9H9V9 463 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 A0A0U1RQG5 324 aaPredicted RBP11.5□□□□□ -0.57
RTCB-201ENST00000216038 FLOT1O75955 427 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 HMGN5P82970 282 aaKnown RBP11.5□□□□□ -0.57
RTCB-201ENST00000216038 PDE4CQ08493 712 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 PKN1Q16512 942 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 LARP1BQ659C4 914 aaKnown RBP11.5□□□□□ -0.57
RTCB-201ENST00000216038 GPKOWQ92917 476 aaPredicted RBP eCLIP11.5□□□□□ -0.57
RTCB-201ENST00000216038 WNK4Q96J92 1243 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 CENPFP49454 3210 aa11.5□□□□□ -0.57
RTCB-201ENST00000216038 A0A0G2JLL6 359 aaPredicted RBP11.49□□□□□ -0.57
RTCB-201ENST00000216038 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
RTCB-201ENST00000216038 WDR46O15213 610 aaKnown RBP11.49□□□□□ -0.57
RTCB-201ENST00000216038 TAL1P17542 331 aaPredicted RBP11.49□□□□□ -0.57
RTCB-201ENST00000216038 SYT1P21579 422 aa11.49□□□□□ -0.57
RTCB-201ENST00000216038 PRRT2Q7Z6L0 340 aaPredicted RBP11.49□□□□□ -0.57
RTCB-201ENST00000216038 ANP32BQ92688 251 aaKnown RBP11.49□□□□□ -0.57
RTCB-201ENST00000216038 LZTS2Q9BRK4 669 aa11.49□□□□□ -0.57
RTCB-201ENST00000216038 ALG1Q9BT22 464 aa11.49□□□□□ -0.57
RTCB-201ENST00000216038 SPZ1Q9BXG8 430 aa11.49□□□□□ -0.57
RTCB-201ENST00000216038 RNF26Q9BY78 433 aaPredicted RBP11.49□□□□□ -0.57
RTCB-201ENST00000216038 RIOX1Q9H6W3 641 aa11.49□□□□□ -0.57
RTCB-201ENST00000216038 PRR12Q9ULL5 1215 aa11.49□□□□□ -0.57
RTCB-201ENST00000216038 KCNH4Q9UQ05 1017 aa11.49□□□□□ -0.57
RTCB-201ENST00000216038 VPS37CA5D8V6 355 aaPredicted RBP11.48□□□□□ -0.57
RTCB-201ENST00000216038 PRPF3O43395 683 aaKnown RBP11.48□□□□□ -0.57
RTCB-201ENST00000216038 DDIT3P35638 169 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 SYDE2Q5VT97 1194 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
RTCB-201ENST00000216038 HEATR3Q7Z4Q2 680 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 RRP36Q96EU6 259 aaKnown RBP11.48□□□□□ -0.57
RTCB-201ENST00000216038 CWC22Q9HCG8 908 aaKnown RBP11.48□□□□□ -0.57
RTCB-201ENST00000216038 VPS54Q9P1Q0 977 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 UNCXA6NJT0 531 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 CXCL11O14625 94 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 DEXIO95424 95 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 FSTL1Q12841 308 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 SNAPC2Q13487 334 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 SPRYD7Q5W111 196 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 CCDC174Q6PII3 467 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 CHURC1Q8WUH1 139 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 SHISA4Q96DD7 197 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 GZF1Q9H116 711 aaPredicted RBP11.48□□□□□ -0.57
RTCB-201ENST00000216038 SEC63Q9UGP8 760 aaKnown RBP11.48□□□□□ -0.57
RTCB-201ENST00000216038 FEM1BQ9UK73 627 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 KCNJ14Q9UNX9 436 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 TLL2Q9Y6L7 1015 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 RLFQ13129 1914 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 COL11A1P12107 1806 aaPredicted RBP11.48□□□□□ -0.57
RTCB-201ENST00000216038 STK36Q9NRP7 1315 aa11.48□□□□□ -0.57
RTCB-201ENST00000216038 DYNC1I1O14576 645 aa11.47□□□□□ -0.57
RTCB-201ENST00000216038 PEX10O60683 326 aa11.47□□□□□ -0.57
RTCB-201ENST00000216038 PPP1R11O60927 126 aaPredicted RBP11.47□□□□□ -0.57
RTCB-201ENST00000216038 SCG2P13521 617 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms