RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ERLIN1O75477 346 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 SCG2P13521 617 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 NOP2P46087 812 aaKnown RBP13.56□□□□□ -0.24
CHPF2-201ENST00000035307 RNASE9P60153 205 aaKnown RBP13.56□□□□□ -0.24
CHPF2-201ENST00000035307 H7C1D1 291 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 ERCC6LQ2NKX8 1250 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 RAB34Q9BZG1 259 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 MACROD2A1Z1Q3 448 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 LRRC8AQ8IWT6 810 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 SUPT20HQ8NEM7 779 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 SPDYE3A6NKU9 549 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 CCDC175P0C221 793 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 PTGDRQ13258 359 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 ATL3Q6DD88 541 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 IGDCC4Q8TDY8 1250 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 CRAMP1Q96RY5 1269 aa13.56□□□□□ -0.24
CHPF2-201ENST00000035307 RIC1Q4ADV7 1423 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 PSMD14O00487 310 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 HOXA13P31271 388 aaPredicted RBP13.55□□□□□ -0.24
CHPF2-201ENST00000035307 CC2D2BQ6DHV5 1058 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 CIAPIN1Q6FI81 312 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 ZFPM1Q8IX07 1006 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 STAG1Q8WVM7 1258 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 RBM28Q9NW13 759 aaKnown RBP13.55□□□□□ -0.24
CHPF2-201ENST00000035307 PODXL2Q9NZ53 605 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 STRCQ7RTU9 1775 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 SYNRGQ9UMZ2 1314 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 MYCLP12524 364 aaPredicted RBP13.55□□□□□ -0.24
CHPF2-201ENST00000035307 EVCP57679 992 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 RASSF7Q02833 373 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 PRPF4BQ13523 1007 aaKnown RBP13.55□□□□□ -0.24
CHPF2-201ENST00000035307 PTPROQ16827 1216 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 CDC42EP5Q6NZY7 148 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 PRMT6Q96LA8 375 aaPredicted RBP13.55□□□□□ -0.24
CHPF2-201ENST00000035307 RIOK1Q9BRS2 568 aaKnown RBP13.55□□□□□ -0.24
CHPF2-201ENST00000035307 RTEL1Q9NZ71 1219 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 TMCO5BA8MYB1 307 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 FDPSP14324 419 aaKnown RBP13.55□□□□□ -0.24
CHPF2-201ENST00000035307 CALML3P27482 149 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 SYCP1Q15431 976 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 CCDC144BQ3MJ40 725 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 SLF1Q9BQI6 1058 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 TMEM39BQ9GZU3 492 aa13.55□□□□□ -0.24
CHPF2-201ENST00000035307 FOXN1O15353 648 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 CMA1P23946 247 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 TECP42680 631 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 LMAN1P49257 510 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 PDE4DQ08499 809 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 KIAA1524Q8TCG1 905 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 TSG101Q99816 390 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 CRACR2AQ9BSW2 395 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 FLT1P17948 1338 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 C12orf60Q5U649 245 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 LEKR1Q6ZMV7 388 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 GJA10Q969M2 543 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■■■■ 50.2
CHPF2-201ENST00000035307 PCDHA1Q9Y5I3 950 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 TCRBV5S4A2TA0A5A2 114 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 ALAS1P13196 640 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 KRT9P35527 623 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 SSR1P43307 286 aaKnown RBP13.54□□□□□ -0.24
CHPF2-201ENST00000035307 SLC39A14Q15043 492 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 SHROOM1Q2M3G4 852 aaPredicted RBP13.54□□□□□ -0.24
CHPF2-201ENST00000035307 KRBA2Q6ZNG9 492 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 PAGR1Q9BTK6 254 aa13.54□□□□□ -0.24
CHPF2-201ENST00000035307 AKR1B15C9JRZ8 316 aaPredicted RBP13.53□□□□□ -0.24
CHPF2-201ENST00000035307 ODF2Q5BJF6 829 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 SRBD1Q8N5C6 995 aaKnown RBP13.53□□□□□ -0.24
CHPF2-201ENST00000035307 SYMPKQ92797 1274 aaKnown RBP13.53□□□□□ -0.24
CHPF2-201ENST00000035307 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHPF2-201ENST00000035307 IFNAR1P17181 557 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
CHPF2-201ENST00000035307 BLIDQ8IZY5 108 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
CHPF2-201ENST00000035307 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
CHPF2-201ENST00000035307 GNA11P29992 359 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 TBC1D8BQ0IIM8 1120 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 SAMSN1Q9NSI8 373 aaKnown RBP13.53□□□□□ -0.24
CHPF2-201ENST00000035307 TMEM260Q9NX78 707 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 EP400Q96L91 3159 aa13.53□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L15C9J2P7 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L13C9JLJ4 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L11C9JVI0 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L18D6R9N7 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L22D6RA61 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L17D6RBQ6 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L19D6RCP7 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L20D6RJB6 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 TM4SF1P30408 202 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 AMPD3Q01432 767 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 CYP4A11Q02928 519 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L24Q0WX57 530 aa13.52□□□□□ -0.24
CHPF2-201ENST00000035307 USP17L6PQ6QN14 398 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms