RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PPP1R18Q6NYC8 613 aa16.33■□□□□ 0.21
RTFDC1-201ENST00000023939 SARM1Q6SZW1 724 aa16.33■□□□□ 0.21
RTFDC1-201ENST00000023939 KRT25Q7Z3Z0 450 aa16.33■□□□□ 0.21
RTFDC1-201ENST00000023939 OGFOD1Q8N543 542 aa16.33■□□□□ 0.21
RTFDC1-201ENST00000023939 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.21
RTFDC1-201ENST00000023939 MTMR8Q96EF0 704 aa16.33■□□□□ 0.21
RTFDC1-201ENST00000023939 PIGSQ96S52 555 aa16.33■□□□□ 0.21
RTFDC1-201ENST00000023939 HERC5Q9UII4 1024 aaKnown RBP16.33■□□□□ 0.21
RTFDC1-201ENST00000023939 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
RTFDC1-201ENST00000023939 RAD17O75943 681 aa16.33■□□□□ 0.2
RTFDC1-201ENST00000023939 ZBTB7AO95365 584 aa16.33■□□□□ 0.2
RTFDC1-201ENST00000023939 DLGAP5Q15398 846 aa16.33■□□□□ 0.2
RTFDC1-201ENST00000023939 CLEC10AQ8IUN9 316 aa16.33■□□□□ 0.2
RTFDC1-201ENST00000023939 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
RTFDC1-201ENST00000023939 CPVLQ9H3G5 476 aa16.33■□□□□ 0.2
RTFDC1-201ENST00000023939 FRMPD2Q68DX3 1309 aaPredicted RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 LAD1O00515 517 aa16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 ACTN4O43707 911 aaKnown RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 EIF6P56537 245 aaKnown RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 ORC2Q13416 577 aaPredicted RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 NT5DC1Q5TFE4 455 aa16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 DHX40Q8IX18 779 aaKnown RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 FAM151AQ8WW52 585 aa16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 ERCC4Q92889 916 aaPredicted RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 PYM1Q9BRP8 204 aaKnown RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 RRAGDQ9NQL2 400 aaPredicted RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 ZNF70Q9UC06 446 aaPredicted RBP16.32■□□□□ 0.2
RTFDC1-201ENST00000023939 BRCA1P38398 1863 aaKnown RBP16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 SMCO2A6NFE2 343 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 GOLGA6L19H0YKK7 550 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 EEF2P13639 858 aaKnown RBP16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 DPCR1Q3MIW9 517 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 SPECC1Q5M775 1068 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 CCDC34Q96HJ3 373 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 ZBED3Q96IU2 234 aaPredicted RBP16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 MCM7P33993 719 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 LONP1P36776 959 aaKnown RBP16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 ABCB5Q2M3G0 1257 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 USP49Q70CQ1 688 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 PLA2G4DQ86XP0 818 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 HOMER1Q86YM7 354 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 TAOK3Q9H2K8 898 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 JMJD4Q9H9V9 463 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 VAT1LQ9HCJ6 419 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 GPCPD1Q9NPB8 672 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 CD2APQ9Y5K6 639 aa16.31■□□□□ 0.2
RTFDC1-201ENST00000023939 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 SLFN14P0C7P3 912 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 SLURP2P0DP57 97 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 CLCN1P35523 988 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 PRPHP41219 470 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 SARSP49591 514 aaKnown RBP16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 CXCL9Q07325 125 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 PNOCQ13519 176 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 POSTNQ15063 836 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 NONOQ15233 471 aaKnown RBP eCLIP16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 ADGRF4Q8IZF3 695 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 RASGRP4Q8TDF6 673 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 SYMPKQ92797 1274 aaKnown RBP16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 SGIP1Q9BQI5 828 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 SERTAD1Q9UHV2 236 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 ZKSCAN5Q9Y2L8 839 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 MYH4Q9Y623 1939 aa16.3■□□□□ 0.2
RTFDC1-201ENST00000023939 LTBP3Q9NS15 1303 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 CNTNAP1P78357 1384 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 FAM196BA6NMK8 535 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 BECN2A8MW95 431 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 TPM3P06753 285 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 ZNF75DP51815 510 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 ICA1Q05084 483 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 SEPT2Q15019 361 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 SH3RF1Q7Z6J0 888 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 FAM83AQ86UY5 434 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 TRIML1Q8N9V2 468 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 GMCL1Q96IK5 515 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 EPSTI1Q96J88 318 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 PCDHA5Q9Y5H7 936 aa16.29■□□□□ 0.2
RTFDC1-201ENST00000023939 VWA3AA6NCI4 1184 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 IKBKBO14920 756 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 ZBTB5O15062 677 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 TBC1D12O60347 775 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 CDC25BP30305 580 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 IL17AQ16552 155 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 INF2Q27J81 1249 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 CCDC96Q2M329 555 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 RBM26Q5T8P6 1007 aaKnown RBP16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 SLFN13Q68D06 897 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 CIAPIN1Q6FI81 312 aa16.28■□□□□ 0.2
RTFDC1-201ENST00000023939 REXO1Q8N1G1 1221 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms