RNA–Protein interactions for RNA: ENSMUST00000198633.4

Chfr-207, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 2,623 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-207ENSMUST00000198633 Ccdc51Q3URS9 406 aa16.48■□□□□ 0.23
Chfr-207ENSMUST00000198633 Epn1Q80VP1 575 aa16.48■□□□□ 0.23
Chfr-207ENSMUST00000198633 Ccdc122Q8BVN0 290 aa16.48■□□□□ 0.23
Chfr-207ENSMUST00000198633 Homer1Q9Z2Y3 366 aa16.48■□□□□ 0.23
Chfr-207ENSMUST00000198633 Rexo5D3YW29 759 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Aco1P28271 889 aaKnown RBP16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Arid3aQ62431 601 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Spice1Q8C804 860 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Zmym2Q9CU65 1376 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 GakQ99KY4 1305 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Ddx23D3Z0M9 819 aaKnown RBP16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Pth1rP41593 591 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Znhit6Q3UFB2 460 aaKnown RBP16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 LarsQ8BMJ2 1178 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Ccdc38Q8CDN8 563 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Fam114a1Q9D281 569 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Sorbs3Q9R1Z8 733 aa16.47■□□□□ 0.23
Chfr-207ENSMUST00000198633 Usp5P56399 858 aaKnown RBP16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Tlr8P58682 1032 aa16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Rtel1Q0VGM9 1203 aa16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Cnnm4Q69ZF7 771 aa16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Phc3Q8CHP6 981 aa16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Smc1aQ9CU62 1233 aaKnown RBP16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Tfap4Q9JIZ5 338 aa16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Sel1lQ9Z2G6 790 aa16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Rbbp6P97868 1790 aaKnown RBP16.46■□□□□ 0.23
Chfr-207ENSMUST00000198633 Herc3A6H6S0 1050 aa16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 Gm5934D3Z4U6 212 aa16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 Nkx2-5P42582 318 aa16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 Ercc6lQ8BHK9 1240 aa16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 LRWD1Q8BUI3 648 aaKnown RBP16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 Rassf4Q8CB96 322 aa16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 Rrp1bQ91YK2 724 aaKnown RBP16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 HibadhQ99L13 335 aaKnown RBP16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 Psmd10Q9Z2X2 231 aa16.46■□□□□ 0.22
Chfr-207ENSMUST00000198633 Gm28042B7ZCM9 1014 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Parp1P11103 1013 aaKnown RBP16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Kcnj4P52189 445 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Prpf38aQ4FK66 312 aaKnown RBP16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Map3k11Q80XI6 850 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Tmem179Q8BHH9 233 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Pcdhgc5Q91XW9 944 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Smc1bQ920F6 1248 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Tmem39aQ9CYC3 486 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 EhhadhQ9DBM2 718 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Prl2c5Q9JLV9 222 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Arfgef1G3X9K3 1846 aaKnown RBP16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Nr1i2O54915 431 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 GnaqP21279 359 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Map9Q3TRR0 646 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Fxr1Q61584 677 aaKnown RBP16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Mtss1lQ6P9S0 715 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Dlg1Q811D0 905 aaKnown RBP16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Phf20l1Q8CCJ9 1013 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 NapgQ9CWZ7 312 aa16.45■□□□□ 0.22
Chfr-207ENSMUST00000198633 Cnbd1B1AWM0 430 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Sgsm1Q8BPQ7 1093 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Tmem134Q8R0J4 195 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Trub2Q91WG3 331 aaKnown RBP16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 MymkQ9D1N4 221 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Tpcn1Q9EQJ0 817 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 AatfQ9JKX4 526 aaKnown RBP16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Duox1A2AQ92 1551 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Myh8P13542 1937 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 VrtnQ3SYK4 740 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 MpndQ3TV65 487 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Tbc1d2bQ3U0J8 965 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 LbrQ3U9G9 626 aaKnown RBP16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Arhgef2Q60875 985 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Fez2Q6TYB5 348 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Fbxo18Q8K2I9 1042 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Znf131Q8K3J5 619 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Slc44a4Q91VA1 707 aa16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 RtcbQ99LF4 505 aaKnown RBP16.44■□□□□ 0.22
Chfr-207ENSMUST00000198633 Alppl2P24823 529 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Cep95Q8BVV7 827 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Bicdl2Q8CHW5 507 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Kiaa0319lQ8K135 1048 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Cabp7Q91ZM8 215 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Dydc2Q9D3X8 139 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Mrpl12Q9DB15 201 aaKnown RBP16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Git2Q9JLQ2 708 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Dnm2P39054 870 aaKnown RBP16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Foxn3Q499D0 457 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Tbc1d23Q8K0F1 684 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Spata4Q8K3V1 295 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Exoc1Q8R3S6 894 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Snrnp35Q9D384 244 aa16.43■□□□□ 0.22
Chfr-207ENSMUST00000198633 Plekhg2Q6KAU7 1340 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Zfp853A0A1D5RM95 733 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Pabpc1lA2A5N3 607 aaKnown RBP16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Stim1P70302 685 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Eya3P97480 510 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Gas1Q01721 343 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Kdm1aQ6ZQ88 853 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Hpcal4Q8BGZ1 191 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Ttc26Q8BS45 554 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 MtrrQ8C1A3 696 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Sash3Q8K352 380 aa16.42■□□□□ 0.22
Chfr-207ENSMUST00000198633 Cdk8Q8R3L8 464 aa16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms