RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Atrnl1Q6A051 1378 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 TicrrQ8BQ33 1889 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 SynrgQ5SV85 1306 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tbc1d2B1AVH7 922 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 LdhbP16125 334 aaKnown RBP8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Sp4Q62445 782 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Lrrcc1Q69ZB0 1026 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 BC048507Q80ZS7 89 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ubxn4Q8VCH8 506 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Myo1hQ9D6A1 958 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Hic2Q9JLZ6 619 aaKnown RBP8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 ArcQ9WV31 396 aa8.55□□□□□ -1.04
Usp40-204ENSMUST00000187758 Dapk3O54784 448 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Epb41l2O70318 988 aaKnown RBP8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Znf697Q569E7 569 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 PRAG1Q571I4 1179 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tas2r124Q7M718 309 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Spata21Q8BHW6 681 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Aldh1b1Q9CZS1 519 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ccdc88aQ5SNZ0 1873 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Myh14Q6URW6 2000 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gucy1a2F8VQK3 730 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 SlkO54988 1233 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Prkg1P0C605 671 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ift122Q6NWV3 1182 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Fam43aQ8BUP8 424 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Kiaa1024Q8K3V7 917 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Defb15Q8R2I5 79 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Hps3Q91VB4 1002 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Vps16Q920Q4 839 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Cul5Q9D5V5 780 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Calml3Q9D6P8 149 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tpm3-rs7D3Z2H9 248 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Traf1P39428 409 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Snap25P60879 206 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Pfkfb1P70266 471 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Fbxo11Q7TPD1 930 aaKnown RBP8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Calhm4Q8CE93 315 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Slc4a8Q8JZR6 1089 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ubxn2aQ99KJ0 258 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ddx20Q9JJY4 825 aaKnown RBP8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Cry2Q9R194 592 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tulp1Q9Z273 543 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Dnaaf5B9EJR8 853 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tph1P17532 447 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Pcdhb14Q6PB90 796 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Dlg1Q811D0 905 aaKnown RBP8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Rnf214Q8BFU3 668 aaKnown RBP8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Fez1Q8K0X8 392 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Kctd10Q922M3 315 aa8.54□□□□□ -1.04
Usp40-204ENSMUST00000187758 Gas2l3Q3UWW6 683 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Armc6Q8BNU0 468 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Lrrd1Q8C0R9 853 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tmem60Q8K174 133 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 AdpgkQ8VDL4 496 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Pdcd6ipQ9WU78 869 aaKnown RBP8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tmem132bF7BAB2 1078 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Rad51bO35719 350 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tmem109Q3UBX0 243 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Krt74Q6IFZ9 495 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Phf20l1Q8CCJ9 1013 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Mrpl11Q9CQF0 192 aaKnown RBP8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Arpp21Q9DCB4 807 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 NrapQ80XB4 1728 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Rrp1P56183 494 aaKnown RBP8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Pls1Q3V0K9 630 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Pla2g4eQ50L42 875 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Jakmip3Q5DTN8 844 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Dusp9Q7TNL7 452 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Ccdc172Q810N9 267 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Oxnad1Q8VE38 311 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Tdrd1Q99MV1 1172 aa8.53□□□□□ -1.04
Usp40-204ENSMUST00000187758 Zscan29E9Q5B4 869 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Ttll12Q3UDE2 639 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 C87499Q3UX49 493 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Tnni3kQ5GIG6 834 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Cnga2Q62398 664 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Sv2cQ69ZS6 727 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Fbxo2Q80UW2 297 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Haus7Q8BKT8 364 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Zfp202Q8C879 641 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Depdc1aQ8CIG0 804 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Onecut3Q8K557 490 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Kcnh3Q9WVJ0 1095 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 XdhQ00519 1335 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Kifap3P70188 793 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Ccdc148Q6P5U8 527 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Peg10Q7TN75 958 aaKnown RBP8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Sap130Q8BIH0 1057 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Apobec3Q99J72 440 aaKnown RBP8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 4921524L21RikQ9D5T2 438 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Myh7bA2AQP0 1941 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Usp31E9Q6Y8 1344 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Btn2a2A4QPC6 514 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Lmod3E9QA62 571 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Rnf216P58283 853 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Rasa3Q60790 834 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Csrnp2Q8BGQ2 534 aa8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Rbm10Q99KG3 930 aaKnown RBP8.52□□□□□ -1.05
Usp40-204ENSMUST00000187758 Slc5a5Q99PN0 618 aa8.52□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms