RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Vps37dQ810I0 261 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Cdan1Q8CC12 1239 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ubxn11Q9D572 484 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Sh2b2Q9JID9 621 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Gm5114W4VSN8 858 aa16.03■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Myh8P13542 1937 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Rabep1O35551 862 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Rad51bO35719 350 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Nf2P46662 596 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Nap1l2P51860 460 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Pla2g6P97819 807 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 PigsQ6PD26 555 aaKnown RBP16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Armc6Q8BNU0 468 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 EngaseQ8BX80 734 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Adgra1Q8C4G9 578 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Rbm19Q8R3C6 952 aaKnown RBP16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Ubiad1Q9DC60 336 aa16.02■□□□□ 0.16
Ercc1-203ENSMUST00000160369 Scn3aA2ASI5 1947 aa16.02■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Gm15262A0A140LIQ5 728 aa16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Dnaaf5B9EJR8 853 aa16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 MyocO70624 490 aa16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Parp2O88554 559 aa16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Cdkl5Q3UTQ8 938 aa16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Fbxo11Q7TPD1 930 aaKnown RBP16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Pgrmc2Q80UU9 217 aaKnown RBP16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Depdc1aQ8CIG0 804 aa16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Rtn1Q8K0T0 780 aa16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Mrpl50Q8VDT9 159 aaKnown RBP16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Serpinb3bQ9D1Q5 387 aa16.01■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Naaladl2A0A0N4SUJ3 795 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Il13ra2O88786 383 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Stat1P42225 749 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Foxp1P58462 705 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Lilrb3P97484 841 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Rnf157Q3TEL6 685 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Podnl1Q6P3Y9 559 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Brd2Q7JJ13 798 aaKnown RBP16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Rassf10Q8BL43 508 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Gpcpd1Q8C0L9 675 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 MslnlQ8C160 685 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Iffo2Q8R2V2 512 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ttc8Q8VD72 515 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ubac1Q8VDI7 409 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Oxnad1Q8VE38 311 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Cep89Q9CZX2 791 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Rufy3Q9D394 469 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ccdc7Q9D541 371 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Gpaa1Q9WTK3 621 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Cdc45Q9Z1X9 566 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Homer1Q9Z2Y3 366 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 PatjQ63ZW7 1834 aa16■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Tmigd3G3X8R9 209 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Cst8P32766 142 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Snap25P60879 206 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Cct2P80314 535 aaKnown RBP15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Babam1Q3UI43 333 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Rhpn1Q61085 643 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ecm1Q61508 559 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ptger2Q62053 362 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ubap2lQ80X50 1107 aaKnown RBP15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Dpp9Q8BVG4 862 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Bclaf1Q8K019 919 aaKnown RBP15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Alpk1Q9CXB8 1231 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 NkapQ9D0F4 415 aaKnown RBP15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Znf704Q9ERQ3 566 aa15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Eif4enif1Q9EST3 983 aaKnown RBP15.99■□□□□ 0.15
Ercc1-203ENSMUST00000160369 C87977A2A958 498 aa15.98■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Zscan20B2KFW1 1030 aa15.98■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ppef2O35385 757 aa15.98■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Stk11ipQ3TAA7 1072 aa15.98■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Pof1bQ8K4L4 587 aa15.98■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Stard7Q8R1R3 373 aa15.98■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Usp26Q99MX1 835 aa15.98■□□□□ 0.15
Ercc1-203ENSMUST00000160369 A0A1Y7VML8 143 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Gm20425E9Q035 978 aaKnown RBP15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Gml2G5E8L7 176 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Dnajb6O54946 365 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Mboat4P0C7A3 435 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 SrprbP47758 269 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Grm1P97772 1199 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Iws1Q8C1D8 766 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ctu1Q99J10 420 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Slc5a5Q99PN0 618 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Galntl5Q9D4M9 431 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Mxra8Q9DBV4 442 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Fem1bQ9Z2G0 627 aa15.97■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Ankrd35E9Q9D8 996 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 MthfslL7N466 203 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Hmgcs2P54869 508 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Atp6v1dP57746 247 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Arhgef2Q60875 985 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Zfp90Q61967 636 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Zcchc18Q8VD24 393 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Dnajc17Q91WT4 303 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Cyp27a1Q9DBG1 533 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 Tmem191cQ9JJB1 302 aa15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 PfkpQ9WUA3 784 aaKnown RBP15.96■□□□□ 0.15
Ercc1-203ENSMUST00000160369 PhipQ8VDD9 1821 aaKnown RBP15.96■□□□□ 0.14
Ercc1-203ENSMUST00000160369 Syt1P46096 421 aa15.95■□□□□ 0.14
Ercc1-203ENSMUST00000160369 WasP70315 520 aa15.95■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 107.9 ms