RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 PigsQ6PD26 555 aaKnown RBP29.24■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Ms4a5Q810P8 197 aa29.24■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Kctd10Q922M3 315 aa29.24■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Atp12aQ9Z1W8 1035 aa29.24■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Gm5134E9QAB5 671 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Copb2O55029 905 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Ccdc172Q810N9 267 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Clic6Q8BHB9 596 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Cep128Q8BI22 1102 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Inpp5bQ8K337 993 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Pspc1Q8R326 523 aaKnown RBP29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Gbp7Q91Z40 638 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Gmcl1Q920G9 524 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Tubgcp2Q921G8 905 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Fam205a1D3YZF6 1314 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 D630036H23RikQ3UQD6 204 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Tshz1Q5DTH5 1084 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 B4galnt4Q766D5 1034 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Armc6Q8BNU0 468 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Ptrh1Q8BW00 204 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Kbtbd13Q8C828 458 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Trex1Q91XB0 314 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Mmtag2Q99LX5 260 aaKnown RBP29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Brms1Q99N20 246 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Tgm5Q9D7I9 724 aa29.23■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Grin2dQ03391 1323 aa29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Armc3A2AU72 881 aa29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Tpm3P21107 285 aaKnown RBP29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Mmp14P53690 582 aa29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Swap70Q6A028 585 aaKnown RBP29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Rrp12Q6P5B0 1295 aaKnown RBP29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Oxsr1Q6P9R2 527 aa29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Dusp9Q7TNL7 452 aa29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Ccdc93Q7TQK5 629 aa29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Kcnk13Q8R1P5 405 aa29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Arpp21Q9DCB4 807 aa29.22■■■□□ 2.27
Tpm1-216ENSMUST00000113707 LdhdQ7TNG8 484 aa29.21■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Camkk2Q8C078 588 aa29.21■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Gpcpd1Q8C0L9 675 aa29.21■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Sdc2P43407 202 aa29.21■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Oxr1Q4KMM3 866 aa29.21■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Slc9c1Q6UJY2 1175 aa29.21■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Ddrgk1Q80WW9 315 aa29.21■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Usp21Q9QZL6 566 aa29.21■■■□□ 2.27
Tpm1-216ENSMUST00000113707 Gm7356A0A087WSA6 508 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Glt1d1A4FUP9 346 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Clrn2B2RVW2 232 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Slc39a2G3X943 309 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Eif5P59325 429 aaKnown RBP29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Map9Q3TRR0 646 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Klrg2Q3UM83 387 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Ube2oQ6ZPJ3 1288 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 E2f4Q8R0K9 410 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 AdpgkQ8VDL4 496 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Gpsm2Q8VDU0 679 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Cul5Q9D5V5 780 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Acot3Q9QYR7 432 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Golgb1E9PVZ8 3238 aa29.2■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Gm973E9Q295 1059 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Wnt10bP48614 389 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Psg29Q3URN6 468 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Tmem39bQ810L4 492 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Ndfip2Q91ZP6 311 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Sgpp1Q9JI99 430 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Serpina16D3Z660 418 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Cap1P40124 474 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Usp13Q5BKP2 858 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Arl6ip4Q9JM93 229 aa29.19■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Atrnl1Q6A051 1378 aa29.18■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Rps12P63323 132 aaKnown RBP29.18■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Thrap3Q569Z6 951 aaKnown RBP29.18■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Prkab1Q9R078 270 aa29.18■■■□□ 2.26
Tpm1-216ENSMUST00000113707 SynrgQ5SV85 1306 aa29.18■■■□□ 2.26
Tpm1-216ENSMUST00000113707 CluhQ5SW19 1315 aa29.18■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Cacna1fQ9JIS7 1985 aa29.18■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Magea6O89010 325 aa29.17■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Pank2Q3U4S0 443 aa29.17■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Vmn1r209Q5NC97 312 aa29.17■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Sun3Q5SS91 320 aa29.17■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Magea3Q6T340 320 aa29.17■■■□□ 2.26
Tpm1-216ENSMUST00000113707 LtbrP50284 415 aa29.17■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Ints4Q8CIM8 964 aa29.17■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Baiap2l1Q9DBJ3 514 aa29.17■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Nedd1P33215 660 aa29.16■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Madcam1Q61826 405 aa29.16■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Lrrcc1Q69ZB0 1026 aa29.16■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Scfd2Q8BTY8 684 aa29.16■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Plcg2Q8CIH5 1265 aa29.16■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Fbxo18Q8K2I9 1042 aa29.16■■■□□ 2.26
Tpm1-216ENSMUST00000113707 GrapQ9CX99 217 aa29.16■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Tspoap1Q7TNF8 1846 aa29.16■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Nr1i2O54915 431 aa29.15■■■□□ 2.26
Tpm1-216ENSMUST00000113707 OatP29758 439 aa29.15■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Lgr6Q3UVD5 967 aa29.15■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Gpbp1Q6NXH3 473 aaKnown RBP29.15■■■□□ 2.26
Tpm1-216ENSMUST00000113707 GypcQ78HU7 95 aa29.15■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Pdcl2Q78Y63 240 aa29.15■■■□□ 2.26
Tpm1-216ENSMUST00000113707 GlyctkQ8QZY2 523 aa29.15■■■□□ 2.26
Tpm1-216ENSMUST00000113707 BccipQ9CWI3 316 aa29.15■■■□□ 2.26
Tpm1-216ENSMUST00000113707 Txnrd2Q9JLT4 524 aa29.15■■■□□ 2.26
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms