RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Arglu1Q3UL36 271 aaKnown RBP12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Gpbp1Q6NXH3 473 aaKnown RBP12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Prdm4Q80V63 803 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Srp68Q8BMA6 625 aaKnown RBP12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Myl6bQ8CI43 207 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Nr2e3Q9QXZ7 395 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ccdc88aQ5SNZ0 1873 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Nhsl1Q8CAF4 1587 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Tmem132bF7BAB2 1078 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Atp1b3P97370 278 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ccdc93Q7TQK5 629 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ttc26Q8BS45 554 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Q8C1R3 189 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 EhhadhQ9DBM2 718 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Rai14Q9EP71 979 aaKnown RBP12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Prl2c5Q9JLV9 222 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Rps8P62242 208 aaKnown RBP12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Rtkn2Q14B46 604 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 MmeQ61391 750 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Cep95Q8BVV7 827 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Mmtag2Q99LX5 260 aaKnown RBP12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Emc10Q3TAS6 258 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Trappc10Q3TLI0 1259 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Pramel6Q810Y9 485 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Slc14a2Q8R4T9 930 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Sf3b3Q921M3 1217 aaKnown RBP12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Card14Q99KF0 999 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Dbndd2Q9CRD4 158 aa12.91□□□□□ -0.34
Vps54-202ENSMUST00000109578 Myh15E9Q264 1925 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Snapc4Q8BP86 1333 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Prl2c3P04768 224 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Homer1Q9Z2Y3 366 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Nup98Q6PFD9 1816 aaKnown RBP12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Prr29B1ARI9 187 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Parp1P11103 1013 aaKnown RBP12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Gm5592Q3V0A6 857 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Carmil2Q3V3V9 1296 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 LrmpQ60664 539 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ccdc73Q8CDM4 1066 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Spata4Q8K3V1 295 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Mad2l2Q9D752 211 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Peak1Q69Z38 1735 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Rfc1P35601 1131 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Rc3h1Q4VGL6 1130 aaKnown RBP12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ccdc122Q8BVN0 290 aa12.9□□□□□ -0.34
Vps54-202ENSMUST00000109578 Ecm29Q6PDI5 1840 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gm5934D3Z4U6 212 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Npy5rO70342 466 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Armc2Q3URY6 854 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Arhgef2Q60875 985 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Znf526Q8BI66 675 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gimap5Q8BWF2 308 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tmem134Q8R0J4 195 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Grin3bQ91ZU9 1003 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Apopt1Q9CQW7 192 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 MymkQ9D1N4 221 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Git2Q9JLQ2 708 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Trp53inp1Q9QXE4 239 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Kif3cO35066 796 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Lrrc4bP0C192 709 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Ccdc38Q8CDN8 563 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Trub2Q91WG3 331 aaKnown RBP12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Gm13023A2A8N2 498 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 ByslO54825 436 aaKnown RBP12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Cct6bQ61390 531 aa12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Sde2Q8K1J5 448 aaKnown RBP12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Syf2Q9D198 242 aaKnown RBP12.89□□□□□ -0.35
Vps54-202ENSMUST00000109578 Mast2Q60592 1734 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Otud7bB2RUR8 840 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Foxn2E9Q7L6 429 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Dnm2P39054 870 aaKnown RBP12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Usp5P56399 858 aaKnown RBP12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Foxn3Q499D0 457 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Exoc1Q8R3S6 894 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Kndc1Q0KK55 1742 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Herc3A6H6S0 1050 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Irak1Q62406 710 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Pabpc4Q6PHQ9 660 aaKnown RBP12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Nek5Q7TSC3 627 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Golga5Q9QYE6 729 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Map7d2A2AG50 781 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Bcl2l12Q9D3J3 255 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 EvplQ9D952 2035 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Clip2Q9Z0H8 1047 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 RaraP11416 462 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Islr2Q5RKR3 745 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Mtss1lQ6P9S0 715 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Atp1a1Q8VDN2 1023 aaKnown RBP12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Pla2g12bQ99P27 195 aa12.88□□□□□ -0.35
Vps54-202ENSMUST00000109578 Zmym2Q9CU65 1376 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Scgb2b11A0A087WR49 112 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 RargP18911 458 aaKnown RBP12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Capza3P70190 299 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Scg2Q03517 617 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Top1Q04750 767 aaKnown RBP12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Lrriq3Q14DL3 633 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Tmem132aQ922P8 1018 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 AdarQ99MU3 1178 aaKnown RBP12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 AllcQ9JHX6 414 aa12.87□□□□□ -0.35
Vps54-202ENSMUST00000109578 Epb41l3Q9WV92 929 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms