RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Col15a1O35206 1367 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 A0A1W2P6Q8 802 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gm9048A0A1W2P7H4 802 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 A0A1W2P7Z8 802 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gm9046A0A1W2P855 802 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 MeiocA2AG06 965 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 AdkP55264 361 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Birc2Q62210 612 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Znf365Q8BG89 408 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ttll1Q91V51 423 aa12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ppil4Q9CXG3 492 aaKnown RBP12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Usp42B2RQC2 1324 aaKnown RBP12.18□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gm3415J3QMS8 315 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Cd3dP04235 173 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 GssP51855 474 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 RilpQ5ND29 369 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Slc51bQ80WK2 128 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Rab44Q8CB87 725 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Spata2Q8K004 515 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Tor1aip1Q921T2 595 aaKnown RBP12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gm3404Q9D506 307 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 TprnA2AI08 749 aaKnown RBP12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Tmem132dQ76HP3 1097 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gtf3c5Q8R2T8 520 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Sar1bQ9CQC9 198 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Akap8Q9DBR0 687 aaKnown RBP12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gm5168Q4KL04 211 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 C130026I21RikQ8C898 291 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Kctd10Q922M3 315 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Clrn2B2RVW2 232 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Pde6aP27664 859 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 YarsQ91WQ3 528 aaKnown RBP12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 PdclQ9DBX2 301 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gpaa1Q9WTK3 621 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Kmt5aQ2YDW7 349 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Tas2r124Q7M718 309 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Kcnk13Q8R1P5 405 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Chd1P40201 1711 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Taf4E9QAP7 1042 aaKnown RBP12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Enc1O35709 589 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Snap25P60879 206 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Dynll2Q9D0M5 89 aa12.17□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Nid2O88322 1403 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 C87499Q3UX49 493 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Sfi1Q3UZY0 1216 aaKnown RBP12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Cfap52Q5F201 620 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Scaf1Q5U4C3 1256 aaKnown RBP12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Trpc6Q61143 930 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Arhgap10Q6Y5D8 786 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Vps52Q8C754 723 aaKnown RBP12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 HgsQ99LI8 775 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 CutaQ9CQ89 177 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Rad23aP54726 363 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Cdr2P97817 455 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 VmacQ8BP01 174 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Tbc1d23Q8K0F1 684 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Tmco4Q91WU4 631 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ebag9Q9D0V7 213 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Lrrc32G3XA59 663 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 RabggtaQ9JHK4 567 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 P2rx7Q9Z1M0 595 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Q3TTJ4 293 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Rbm15bQ6PHZ5 887 aaKnown RBP12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ppp2r2cQ8BG02 447 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Pak2Q8CIN4 524 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Fam114a1Q9D281 569 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Sdr42e1Q9D665 394 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Sept6Q9R1T4 434 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Fndc1E9Q043 1732 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 1700113H08RikE9Q9Q5 327 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Trap1aP19473 224 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 NpeppsQ11011 920 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Taok1Q5F2E8 1001 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Fxr1Q61584 677 aaKnown RBP12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ripor2Q80U16 1078 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Znf526Q8BI66 675 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 CactinQ9CS00 772 aaKnown RBP12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ddx24Q9ESV0 857 aaKnown RBP12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Rims1Q99NE5 1463 aa12.16□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Apol11aE9PZG0 334 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Sox13Q04891 613 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Cct8l1Q80YT3 562 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Susd4Q8BH32 490 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Znf76Q8BMU0 568 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 AsphQ8BSY0 741 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Hgh1Q8C3I8 393 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Atp2a1Q8R429 994 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Mfap3Q922T2 349 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ccdc125Q5U465 500 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gngt1Q61012 74 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Cacnb1Q8R3Z5 597 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Prr5lA2AVJ5 370 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Krt8P11679 490 aaKnown RBP12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Meis1Q60954 390 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 MarsQ68FL6 902 aaKnown RBP12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Slc44a1Q6X893 653 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ttll4Q80UG8 1193 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Zfp113Q8C689 439 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 PpanQ91YU8 470 aaKnown RBP12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Nrbp1Q99J45 535 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms