RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Tmco3Q8BH01 678 aa13.82□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Ccdc38Q8CDN8 563 aa13.82□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Adam7O35227 789 aa13.82□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Il7P10168 154 aa13.82□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Tm4sf1Q64302 202 aa13.82□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Mxd3Q80US8 206 aa13.82□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Nod2Q8K3Z0 1020 aa13.82□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Sned1Q70E20 1403 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Rbm19Q8R3C6 952 aaKnown RBP13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Tut1Q8R3F9 869 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Txnrd3Q99MD6 652 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Cd2apQ9JLQ0 637 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 A0A1L1SQF0 893 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 PnnO35691 725 aaKnown RBP13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Wdhd1P59328 1117 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Eya3P97480 510 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Dpf2Q61103 391 aaKnown RBP13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Mboat7Q8CHK3 473 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 MicalclQ9D5U9 680 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Lmbr1Q9JIT0 490 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Ubxn8Q9QZ49 277 aa13.81□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Cyp26c1B2RXA7 518 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Evi5P97366 809 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Acbd5Q5XG73 508 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Nell2Q61220 819 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Hspa4Q61316 841 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Podxl2Q8CAE9 603 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Calml3Q9D6P8 149 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Nek3Q9R0A5 511 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Usp17lbE9Q9U0 468 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Rgs22G3UYX5 1258 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Api5O35841 504 aaKnown RBP13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Terf1P70371 421 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Trappc10Q3TLI0 1259 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Armc2Q3URY6 854 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Mdh1bQ5F204 500 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Clic6Q8BHB9 596 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Tmem60Q8K174 133 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 WaslQ91YD9 501 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Ercc4Q9QZD4 917 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 GmnnO88513 206 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 GnaqP21279 359 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 EmbP21995 330 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Alppl2P24823 529 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Fam178bQ24JP3 464 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Chrna5Q2MKA5 467 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Ncoa7Q6DFV7 943 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Klrc1Q9Z202 244 aa13.8□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Tex13cD3YU32 604 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Fam186bD3Z420 943 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Zscan18E9PUD6 809 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Gm5624F6ZZG8 207 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Cdh15P33146 784 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 EgfrQ01279 1210 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 ItpripQ3TNL8 555 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Bag1Q60739 355 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Slc9a1Q61165 820 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Tacc1Q6Y685 774 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Pde5aQ8CG03 865 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Zbed3Q9D0L1 228 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Psmd10Q9Z2X2 231 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Rsrc2A2RTL5 376 aaKnown RBP13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Kifc2O08672 792 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Nfil3O08750 462 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 LtbrP50284 415 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Ric8aQ3TIR3 530 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 PRAG1Q571I4 1179 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Npdc1Q64322 332 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 BaatQ91X34 420 aa13.79□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Kcna1P16388 495 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Nap1l2P51860 460 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Usp5P56399 858 aaKnown RBP13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Foxd1Q61345 456 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Kctd3Q8BFX3 815 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Pcdhb5Q91XZ5 792 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 VirmaA2AIV2 1811 aaKnown RBP13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Vmn2r68L7N2B3 851 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Aco1P28271 889 aaKnown RBP13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Nsrp1Q5NCR9 542 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Bicdl2Q8CHW5 507 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Sh2b1Q91ZM2 756 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Scrn1Q9CZC8 414 aa13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Akap8Q9DBR0 687 aaKnown RBP13.78□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Cnnm4Q69ZF7 771 aa13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Krt39Q6IFX4 482 aa13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Hdac4Q6NZM9 1076 aa13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Trmt2aQ8BNV1 574 aaKnown RBP13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Skor1Q8BX46 964 aa13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Nek9Q8K1R7 984 aa13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 RabggtaQ9JHK4 567 aa13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Ppp2r3dQ9Z176 491 aa13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Cyp2ab1S4R196 498 aa13.77□□□□□ -0.2
Vamp1-203ENSMUST00000100942 Zfp853A0A1D5RM95 733 aa13.77□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Mboat4P0C7A3 435 aa13.77□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Sdc2P43407 202 aa13.77□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Eef2P58252 858 aaKnown RBP13.77□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Nat10Q8K224 1024 aaKnown RBP13.77□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Ccdc12Q8R344 166 aaKnown RBP13.77□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Tfap4Q9JIZ5 338 aa13.77□□□□□ -0.21
Vamp1-203ENSMUST00000100942 CluhQ5SW19 1315 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms