RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Ifi207E9Q3L4 978 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Cyp26a1O55127 497 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tbc1d23Q8K0F1 684 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Enox2Q8R0Z2 598 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Znf830Q8R1N0 363 aaKnown RBP17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Apol11aE9PZG0 334 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Pla2g4eQ50L42 875 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 DeptorQ570Y9 409 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tsr1Q5SWD9 803 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Sap130Q8BIH0 1057 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Sgsm1Q8BPQ7 1093 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Med10Q9CXU0 135 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 PrphP15331 475 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 FerP70451 823 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Spata21Q8BHW6 681 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Lrp2bpQ9D4C6 346 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Gm5592Q3V0A6 857 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 GopcQ8BH60 463 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Me3Q8BMF3 604 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Actn2Q9JI91 894 aa17.36■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Mbd5B1AYB6 1498 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Gm6583E9Q8Z1 469 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Psmc4P54775 418 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Vps41Q5KU39 853 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Krt9Q6RHW0 743 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Prune1Q8BIW1 454 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Smim5Q8BT42 78 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Efcab8Q8C9R9 203 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Trim68Q8K243 485 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Thap12Q9CUX1 758 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Fyb2A2A995 729 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ercc5P35689 1170 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tgfb1i1Q62219 461 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Card14Q99KF0 999 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Prdm2A2A7B5 1709 aaKnown RBP17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ccdc13D3YV10 709 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Cd3dP04235 173 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Trappc10Q3TLI0 1259 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Apol10aQ8CCA5 318 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ttll1Q91V51 423 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ccdc7Q9D541 371 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 SyncQ9EPM5 470 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tfcp2Q9ERA0 502 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Mageb2A2AHM0 380 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Kcnj14Q8JZN3 434 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Appl2Q8K3G9 662 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 4933428M09RikQ9D3X3 192 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Arpp21Q9DCB4 807 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 AglF8VPN4 1532 aa17.35■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Kcnh4A2A5F7 1018 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Nedd9O35177 833 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Ap1b1O35643 943 aaKnown RBP17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Slc12a2P55012 1205 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Krt87Q6IMF0 495 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Kif11Q6P9P6 1052 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Gpcpd1Q8C0L9 675 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Bola3Q8CEI1 110 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Gtpbp10Q8K013 366 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tubgcp2Q921G8 905 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Gm32742A0A1B0GT42 1604 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Gm20425E9Q035 978 aaKnown RBP17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Flot1O08917 428 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Actn3O88990 900 aaKnown RBP17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 SrprbP47758 269 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 CutaQ9CQ89 177 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Serpinb12Q9D7P9 423 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 PdclQ9DBX2 301 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tnfrsf10bQ9QZM4 381 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Surf6P70279 355 aaKnown RBP17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Nom1Q3UFM5 854 aaKnown RBP17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Cyp2c67Q569X9 491 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Rbm41Q8JZV4 413 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Rbm6S4R1W5 1118 aaKnown RBP17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 CactinQ9CS00 772 aaKnown RBP17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 CsadQ9DBE0 493 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tex13c2A0A0G2JGA3 530 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 1700113H08RikE9Q9Q5 327 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Tcp1P11983 556 aaKnown RBP17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Fhdc1Q3ULZ2 1149 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 CtsqQ91ZF4 343 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Syap1Q9D5V6 365 aa17.34■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Zcchc11B2RX14 1644 aaKnown RBP17.33■□□□□ 0.37
Clcn3-203ENSMUST00000093490 Gm1661E9Q963 441 aa17.33■□□□□ 0.37
Clcn3-203ENSMUST00000093490 GabpaQ00422 454 aa17.33■□□□□ 0.37
Clcn3-203ENSMUST00000093490 DbnlQ62418 436 aa17.33■□□□□ 0.37
Clcn3-203ENSMUST00000093490 RragaQ80X95 313 aa17.33■□□□□ 0.36
Clcn3-203ENSMUST00000093490 6820408C15RikQ8BJX2 354 aa17.33■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Dnajc25A2ALW5 357 aa17.33■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Myo1aO88329 1043 aa17.33■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Acot10Q32MW3 439 aa17.33■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Cyp3a57D3YYZ0 503 aa17.33■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Tmod1P49813 359 aa17.33■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Nod2Q8K3Z0 1020 aa17.33■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Rnf40Q3U319 1001 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Mier3Q3UHF3 551 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Sv2cQ69ZS6 727 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Trim37Q6PCX9 961 aa17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Vps52Q8C754 723 aaKnown RBP17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Ddx41Q91VN6 622 aaKnown RBP17.32■□□□□ 0.36
Clcn3-203ENSMUST00000093490 Pcdha7Q91Y13 937 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms