RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Evc2Q8K1G2 1220 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Nr3c2Q8VII8 978 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Mrpl11Q9CQF0 192 aaKnown RBP10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Arhgef25Q9CWR0 618 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Upf1Q9EPU0 1124 aaKnown RBP10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Ifi202Q9R002 445 aa10.21□□□□□ -0.77
Ccdc28a-201ENSMUST00000052648 Usp17ldG5E8G2 545 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Usp17lcG5E8I7 545 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Snap25P60879 206 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Spryd7Q3TFQ1 196 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Mars2Q499X9 586 aaKnown RBP10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ifit1Q64282 463 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Recql4Q75NR7 1216 aaKnown RBP10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Peg10Q7TN75 958 aaKnown RBP10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 PogkQ80TC5 607 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Acnat2Q8BGG9 420 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Lrrc24Q8BHA1 521 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Dnaaf2Q8BPI1 814 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Zhx2Q8C0C0 836 aaKnown RBP10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Onecut3Q8K557 490 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 TbcbQ9D1E6 244 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Tfcp2Q9ERA0 502 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Tmem191cQ9JJB1 302 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Bub1bQ9Z1S0 1052 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Sel1lQ9Z2G6 790 aa10.21□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 DaxxO35613 739 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Kifap3P70188 793 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Kmt5bQ3U8K7 883 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Nol12Q8BG17 217 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Sap130Q8BIH0 1057 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Kdm4aQ8BW72 1064 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 PpatQ8CIH9 517 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Atp5c1Q91VR2 298 aaKnown RBP10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 HlcsQ920N2 722 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Galntl5Q9D4M9 431 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 SerhlQ9EPB5 311 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ngly1Q9JI78 651 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ubxn8Q9QZ49 277 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 IkQ9Z1M8 557 aaKnown RBP10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Btbd19S4R1I0 287 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Usp34Q6ZQ93 3582 aa10.2□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ripor3A1L3T7 938 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Btn2a2A4QPC6 514 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Rfpl4bJ3QPR6 266 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 NefhP19246 1090 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ccnd3P30282 292 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 CgnP59242 1191 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Gcnt1Q09324 428 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Oxr1Q4KMM3 866 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ccdc66Q6NS45 935 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Fbxo11Q7TPD1 930 aaKnown RBP10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Siglec10Q80ZE3 688 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Slc4a8Q8JZR6 1089 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Mov10l1Q99MV5 1187 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 PdhbQ9D051 359 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Cdca7Q9D0M2 382 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Etnk1Q9D4V0 363 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ubiad1Q9DC60 336 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Nlrp5Q9R1M5 1163 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 B020004C17RikJ3QP07 232 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Rad51bO35719 350 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 CatspereP0DP43 985 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Hoxc10P31257 342 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Churc1Q6DG52 112 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Brd2Q7JJ13 798 aaKnown RBP10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Supt20hQ7TT00 530 aaKnown RBP10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Vps37dQ810I0 261 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Bloc1s4Q8VED2 215 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Slc5a5Q99PN0 618 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ndufb9Q9CQJ8 179 aa10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Zdbf2Q5SS00 2493 aaKnown RBP10.19□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Gm15448F6PZL4 682 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Cplx1P63040 134 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Traf5P70191 558 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Fam89aQ14BJ1 175 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Kctd3Q8BFX3 815 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Senp7Q8BUH8 1037 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Zfp317Q8C0Q5 607 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Serpinb13Q8CDC0 389 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Tmx2Q9D710 295 aaKnown RBP10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Mad1l1Q9WTX8 717 aaKnown RBP10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Zmynd8A2A484 1235 aaKnown RBP10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Dhx8A2A4P0 1244 aaKnown RBP10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 U2af2P26369 475 aaKnown RBP10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ddit3P35639 168 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 DpydQ8CHR6 1025 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 DnerQ8JZM4 737 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Nat10Q8K224 1024 aaKnown RBP10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Tesk2Q8VCT9 570 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 DaglbQ91WC9 669 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Fndc3c1Q6DFV6 1356 aa10.18□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ccng2O08918 344 aa10.17□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 EporP14753 507 aa10.17□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Gna11P21278 359 aa10.17□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Cyp2e1Q05421 493 aa10.17□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 BcrQ6PAJ1 1270 aa10.17□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 R3hcc1Q8BSI6 488 aa10.17□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Bco2Q99NF1 532 aa10.17□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 Ttc6G3UYY4 1857 aa10.17□□□□□ -0.78
Ccdc28a-201ENSMUST00000052648 C87977A2A958 498 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms