RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C PEX5P35056 612 aa5.74□□□□□ -1.49
SEC20YDR498C PTC1P35182 281 aa5.74□□□□□ -1.49
SEC20YDR498C APM3P38153 483 aa5.74□□□□□ -1.49
SEC20YDR498C TRM5P38793 499 aa5.74□□□□□ -1.49
SEC20YDR498C PIK1P39104 1066 aa5.74□□□□□ -1.49
SEC20YDR498C TIM17P39515 158 aa5.74□□□□□ -1.49
SEC20YDR498C JHD1P40034 492 aa5.74□□□□□ -1.49
SEC20YDR498C COA1P40452 197 aa5.74□□□□□ -1.49
SEC20YDR498C PRM2P40534 656 aa5.74□□□□□ -1.49
SEC20YDR498C MDJ2P42834 146 aa5.74□□□□□ -1.49
SEC20YDR498C ARC1P46672 376 aaKnown RBP5.74□□□□□ -1.49
SEC20YDR498C RIM21P48565 533 aa5.74□□□□□ -1.49
SEC20YDR498C SAP4P53036 818 aa5.74□□□□□ -1.49
SEC20YDR498C COG1P53079 417 aa5.74□□□□□ -1.49
SEC20YDR498C PEX8P53248 589 aa5.74□□□□□ -1.49
SEC20YDR498C IST1P53843 298 aaPredicted RBP5.74□□□□□ -1.49
SEC20YDR498C YNL018CP53976 612 aa5.74□□□□□ -1.49
SEC20YDR498C CDC14Q00684 551 aa5.74□□□□□ -1.49
SEC20YDR498C ATP25Q03153 612 aa5.74□□□□□ -1.49
SEC20YDR498C CRN1Q06440 651 aa5.74□□□□□ -1.49
SEC20YDR498C ASA1Q06822 443 aa5.74□□□□□ -1.49
SEC20YDR498C YEH2Q07950 538 aa5.74□□□□□ -1.49
SEC20YDR498C TRE2Q08693 809 aa5.74□□□□□ -1.49
SEC20YDR498C ATP2P00830 511 aaKnown RBP5.73□□□□□ -1.49
SEC20YDR498C SEC53P07283 254 aaKnown RBP5.73□□□□□ -1.49
SEC20YDR498C HSC82P15108 705 aaKnown RBP5.73□□□□□ -1.49
SEC20YDR498C KGD2P19262 463 aaPredicted RBP5.73□□□□□ -1.49
SEC20YDR498C RBK1P25332 333 aa5.73□□□□□ -1.49
SEC20YDR498C AEP1P32493 518 aa5.73□□□□□ -1.49
SEC20YDR498C SPR1P32603 445 aa5.73□□□□□ -1.49
SEC20YDR498C PTM1P32857 523 aa5.73□□□□□ -1.49
SEC20YDR498C NUP120P35729 1037 aa5.73□□□□□ -1.49
SEC20YDR498C TGL4P36165 910 aa5.73□□□□□ -1.49
SEC20YDR498C SAF1P38352 637 aa5.73□□□□□ -1.49
SEC20YDR498C YHB1P39676 399 aaKnown RBP5.73□□□□□ -1.49
SEC20YDR498C ALG5P40350 334 aa5.73□□□□□ -1.49
SEC20YDR498C PAN6P40459 309 aa5.73□□□□□ -1.49
SEC20YDR498C HPM1P40481 377 aa5.73□□□□□ -1.49
SEC20YDR498C UFE1P41834 346 aa5.73□□□□□ -1.49
SEC20YDR498C BST1P43571 1029 aa5.73□□□□□ -1.49
SEC20YDR498C PRP24P49960 444 aaKnown RBP5.73□□□□□ -1.49
SEC20YDR498C MIG2P53035 382 aa5.73□□□□□ -1.49
SEC20YDR498C YTP1P53584 459 aa5.73□□□□□ -1.49
SEC20YDR498C YNR063WP53749 607 aa5.73□□□□□ -1.49
SEC20YDR498C IPI3P53877 555 aa5.73□□□□□ -1.49
SEC20YDR498C ARP4P80428 489 aa5.73□□□□□ -1.49
SEC20YDR498C SPP2Q02521 185 aa5.73□□□□□ -1.49
SEC20YDR498C YDR476CQ03362 224 aa5.73□□□□□ -1.49
SEC20YDR498C ACL4Q03771 387 aa5.73□□□□□ -1.49
SEC20YDR498C GTB1Q04924 702 aa5.73□□□□□ -1.49
SEC20YDR498C ISR1Q06098 443 aaKnown RBP5.73□□□□□ -1.49
SEC20YDR498C YLR012CQ07927 99 aa5.73□□□□□ -1.49
SEC20YDR498C PEX15Q08215 383 aa5.73□□□□□ -1.49
SEC20YDR498C ESA1Q08649 445 aa5.73□□□□□ -1.49
SEC20YDR498C GPN2Q08726 347 aaPredicted RBP5.73□□□□□ -1.49
SEC20YDR498C NUS1Q12063 375 aa5.73□□□□□ -1.49
SEC20YDR498C YLR046CQ12253 270 aa5.73□□□□□ -1.49
SEC20YDR498C ENO1P00924 437 aaKnown RBP5.72□□□□□ -1.49
SEC20YDR498C TRX2P22803 104 aaKnown RBP5.72□□□□□ -1.49
SEC20YDR498C DCC1P25559 380 aa5.72□□□□□ -1.49
SEC20YDR498C GEX1P25596 615 aa5.72□□□□□ -1.49
SEC20YDR498C HEM3P28789 327 aa5.72□□□□□ -1.49
SEC20YDR498C TOA1P32773 286 aa5.72□□□□□ -1.49
SEC20YDR498C CUE2P36075 443 aaKnown RBP5.72□□□□□ -1.49
SEC20YDR498C GEX2P36173 615 aa5.72□□□□□ -1.49
SEC20YDR498C RIM11P38615 370 aa5.72□□□□□ -1.49
SEC20YDR498C SOH1P38633 127 aa5.72□□□□□ -1.49
SEC20YDR498C BTT1P40314 149 aaPredicted RBP5.72□□□□□ -1.49
SEC20YDR498C MAM33P40513 266 aa5.72□□□□□ -1.49
SEC20YDR498C PTR3P43606 678 aa5.72□□□□□ -1.49
SEC20YDR498C STB2P46679 850 aa5.72□□□□□ -1.49
SEC20YDR498C SET2P46995 733 aaKnown RBP5.72□□□□□ -1.49
SEC20YDR498C YNL034WP53963 612 aa5.72□□□□□ -1.49
SEC20YDR498C RMI1Q02685 241 aa5.72□□□□□ -1.49
SEC20YDR498C PET117Q02771 107 aa5.72□□□□□ -1.49
SEC20YDR498C GOT1Q03554 138 aa5.72□□□□□ -1.49
SEC20YDR498C TRM12Q04235 462 aa5.72□□□□□ -1.49
SEC20YDR498C RTN1Q04947 295 aaKnown RBP5.72□□□□□ -1.49
SEC20YDR498C CDA1Q06702 301 aa5.72□□□□□ -1.49
SEC20YDR498C YOL019WQ08157 551 aa5.72□□□□□ -1.49
SEC20YDR498C BDS1Q08347 646 aa5.72□□□□□ -1.49
SEC20YDR498C MDY2Q12285 212 aa5.72□□□□□ -1.49
SEC20YDR498C YVC1Q12324 675 aa5.72□□□□□ -1.49
SEC20YDR498C ICT1Q12385 394 aa5.72□□□□□ -1.49
SEC20YDR498C PEX11Q12462 236 aa5.72□□□□□ -1.49
SEC20YDR498C CAR1P00812 333 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C RPL24AP04449 155 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C ART10P18634 518 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C SEC15P22224 910 aa5.71□□□□□ -1.5
SEC20YDR498C YSP3P25036 478 aa5.71□□□□□ -1.5
SEC20YDR498C CCR4P31384 837 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C SSE1P32589 693 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C IMP3P32899 183 aaPredicted RBP5.71□□□□□ -1.5
SEC20YDR498C SCD5P34758 872 aa5.71□□□□□ -1.5
SEC20YDR498C SRP72P38688 640 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C YHL041WP38730 149 aa5.71□□□□□ -1.5
SEC20YDR498C SHU2P38957 223 aa5.71□□□□□ -1.5
SEC20YDR498C VAC8P39968 578 aa5.71□□□□□ -1.5
SEC20YDR498C HAT2P39984 401 aa5.71□□□□□ -1.5
SEC20YDR498C JEM1P40358 645 aa5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms