RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CNGA4Q8IV77 575 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 PNKPQ96T60 521 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 GDAQ9Y2T3 454 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 MYH6P13533 1939 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 PLCH1Q4KWH8 1693 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 CYP2D6P10635 497 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 NLRP5P59047 1200 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 NEK11Q8NG66 645 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 ABHD10Q9NUJ1 306 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.64■□□□□ 0.09
PHGDH-233ENST00000642021 DUOX1Q9NRD9 1551 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 ARHGAP25P42331 645 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 COPB1P53618 953 aaKnown RBP15.64■□□□□ 0.09
PHGDH-233ENST00000642021 HNRNPH2P55795 449 aaKnown RBP15.64■□□□□ 0.09
PHGDH-233ENST00000642021 KIF4BQ2VIQ3 1234 aa15.64■□□□□ 0.09
PHGDH-233ENST00000642021 ITIH6Q6UXX5 1313 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 LOC102724428A0A0B4J2F2 783 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 CCDC151A5D8V7 595 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 H3BQF6 201 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 DDAH1O94760 285 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 SCG2P13521 617 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 SIK1P57059 783 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 ERFEQ4G0M1 354 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 NELFBQ8WX92 580 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 GNL3LQ9NVN8 582 aaKnown RBP15.63■□□□□ 0.09
PHGDH-233ENST00000642021 RWDD2AQ9UIY3 292 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 BAZ2AQ9UIF9 1905 aaKnown RBP15.63■□□□□ 0.09
PHGDH-233ENST00000642021 CALM1P0DP23 149 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 CALM2P0DP24 149 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 CALM3P0DP25 149 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 SLC4A8Q2Y0W8 1093 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 TCP11X2Q5H9J9 407 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 CHP1Q99653 195 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 SUGCTQ9HAC7 445 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 MINPP1Q9UNW1 487 aa15.63■□□□□ 0.09
PHGDH-233ENST00000642021 CACNA1SQ13698 1873 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 MAP2K7O14733 419 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 ZBTB22O15209 634 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 GTPBP6O43824 516 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-233ENST00000642021 PRCPP42785 496 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 PAK1Q13153 545 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 UBE4AQ14139 1066 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 IRF2BP1Q8IU81 584 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 ANKRD18AQ8IVF6 992 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 C4orf32Q8N8J7 132 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 CTCFLQ8NI51 663 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-233ENST00000642021 NSUN4Q96CB9 384 aaKnown RBP15.62■□□□□ 0.09
PHGDH-233ENST00000642021 NUP88Q99567 741 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-233ENST00000642021 SLF1Q9BQI6 1058 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 DCP1AQ9NPI6 582 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-233ENST00000642021 TRIM49BA6NDI0 452 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 KCNJ18B7U540 433 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 KCNJ12Q14500 433 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 BEND6Q5SZJ8 279 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-233ENST00000642021 TMTC1Q8IUR5 882 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 RASGRP4Q8TDF6 673 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 CCDC51Q96ER9 411 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 FAM205AQ6ZU69 1335 aa15.62■□□□□ 0.09
PHGDH-233ENST00000642021 CTAGE9A4FU28 777 aa15.61■□□□□ 0.09
PHGDH-233ENST00000642021 KRT9P35527 623 aa15.61■□□□□ 0.09
PHGDH-233ENST00000642021 MECOMQ03112 1051 aa15.61■□□□□ 0.09
PHGDH-233ENST00000642021 PFKFB3Q16875 520 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 CAVIN4Q5BKX8 364 aa15.61■□□□□ 0.09
PHGDH-233ENST00000642021 ZNF658Q5TYW1 1059 aaPredicted RBP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 RCSD1Q6JBY9 416 aa15.61■□□□□ 0.09
PHGDH-233ENST00000642021 CELF1Q92879 486 aaKnown RBP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 BCCIPQ9P287 314 aaKnown RBP eCLIP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 TRIM10Q9UDY6 481 aa15.61■□□□□ 0.09
PHGDH-233ENST00000642021 TTF2Q9UNY4 1162 aaKnown RBP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 RPN1P04843 607 aaKnown RBP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 PMS1P54277 932 aaKnown RBP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 BRD3Q15059 726 aa15.61■□□□□ 0.09
PHGDH-233ENST00000642021 CEP112Q8N8E3 955 aa15.61■□□□□ 0.09
PHGDH-233ENST00000642021 GPKOWQ92917 476 aaPredicted RBP eCLIP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 REXO2Q9Y3B8 237 aaKnown RBP15.61■□□□□ 0.09
PHGDH-233ENST00000642021 PP2D1A8MPX8 630 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 RHOXF2BP0C7M4 288 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 WWC2Q6AWC2 1192 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 RHOXF2Q9BQY4 288 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 BSDC1Q9NW68 430 aaPredicted RBP15.6■□□□□ 0.09
PHGDH-233ENST00000642021 RAB21Q9UL25 225 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 ORC4O43929 436 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 MCM6Q14566 821 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 NAALADL2Q58DX5 795 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 JAKMIP3Q5VZ66 844 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 TYW1BQ6NUM6 668 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 MSANTD4Q8NCY6 345 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 ABCB6Q9NP58 842 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 TFR2Q9UP52 801 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 JAG2Q9Y219 1238 aa15.6■□□□□ 0.09
PHGDH-233ENST00000642021 PRDX5P30044 214 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 TRAPPC10P48553 1259 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 UBXN1Q04323 297 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 CYP26C1Q6V0L0 522 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 TAF1P21675 1872 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 TTC26A0AVF1 554 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 PCP11498 1178 aaKnown RBP15.59■□□□□ 0.09
PHGDH-233ENST00000642021 STAG2Q8N3U4 1231 aa15.59■□□□□ 0.09
PHGDH-233ENST00000642021 NOA1Q8NC60 698 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms