RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 FAM217BQ9NTX9 383 aaPredicted RBP20.34■□□□□ 0.85
PHGDH-230ENST00000641927 MAD2L2Q9UI95 211 aa20.34■□□□□ 0.85
PHGDH-230ENST00000641927 NID2Q14112 1375 aa20.34■□□□□ 0.85
PHGDH-230ENST00000641927 DGKZQ13574 1117 aa20.33■□□□□ 0.85
PHGDH-230ENST00000641927 ASPRV1Q53RT3 343 aa20.33■□□□□ 0.85
PHGDH-230ENST00000641927 KCTD1Q719H9 257 aa20.33■□□□□ 0.85
PHGDH-230ENST00000641927 GMCL1Q96IK5 515 aa20.33■□□□□ 0.85
PHGDH-230ENST00000641927 KLRF2D3W0D1 207 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 CDKL5O76039 1030 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 PLEKHA8P1O95397 391 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 SNHG28P0DPA3 235 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 HMGCS2P54868 508 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 FSTL1Q12841 308 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 KIAA1755Q5JYT7 1200 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 SMC3Q9UQE7 1217 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 PALM3A6NDB9 673 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-230ENST00000641927 C19orf81C9J6K1 198 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 IRF6O14896 467 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 BMP3P12645 472 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 GNAQP50148 359 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 ZNF543Q08ER8 600 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 IKQ13123 557 aaPredicted RBP20.32■□□□□ 0.84
PHGDH-230ENST00000641927 GPATCH4Q5T3I0 446 aaKnown RBP20.32■□□□□ 0.84
PHGDH-230ENST00000641927 TMTC3Q6ZXV5 915 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 DDX11Q96FC9 970 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 INTS4Q96HW7 963 aaKnown RBP20.32■□□□□ 0.84
PHGDH-230ENST00000641927 LLPHQ9BRT6 129 aaKnown RBP20.32■□□□□ 0.84
PHGDH-230ENST00000641927 TMOD4Q9NZQ9 345 aa20.32■□□□□ 0.84
PHGDH-230ENST00000641927 PHIPQ8WWQ0 1821 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 PTPDC1A2A3K4 754 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 JAK2O60674 1132 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 CTDNEP1O95476 244 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 PPIL2Q13356 520 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 FAM83BQ5T0W9 1011 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 LPAR1Q92633 364 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 PHKBQ93100 1093 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 CPVLQ9H3G5 476 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 EMILIN3Q9NT22 766 aa20.31■□□□□ 0.84
PHGDH-230ENST00000641927 SRBD1Q8N5C6 995 aaKnown RBP20.3■□□□□ 0.84
PHGDH-230ENST00000641927 NSUN7Q8NE18 718 aaKnown RBP20.3■□□□□ 0.84
PHGDH-230ENST00000641927 SLC26A6Q9BXS9 759 aa20.3■□□□□ 0.84
PHGDH-230ENST00000641927 UBA5Q9GZZ9 404 aa20.3■□□□□ 0.84
PHGDH-230ENST00000641927 ABT1Q9ULW3 272 aaKnown RBP20.3■□□□□ 0.84
PHGDH-230ENST00000641927 TMEM232C9JQI7 657 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 SLC16A2P36021 539 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 MKRN3Q13064 507 aaKnown RBP20.29■□□□□ 0.84
PHGDH-230ENST00000641927 NTRK3Q16288 839 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 TTBK2Q6IQ55 1244 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 SAPCD2Q86UD0 394 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 TRIM22Q8IYM9 498 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 PIBF1Q8WXW3 757 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 LZTS2Q9BRK4 669 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 TMEM88BA6NKF7 163 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 IFNAR1P17181 557 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 VCAM1P19320 739 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 AKAP17AQ02040 695 aaKnown RBP20.29■□□□□ 0.84
PHGDH-230ENST00000641927 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
PHGDH-230ENST00000641927 SAMD1Q6SPF0 538 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-230ENST00000641927 NBPF11Q86T75 865 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 WNK4Q96J92 1243 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 TANGO6Q9C0B7 1094 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 VAT1LQ9HCJ6 419 aa20.29■□□□□ 0.84
PHGDH-230ENST00000641927 CXCL11O14625 94 aa20.28■□□□□ 0.84
PHGDH-230ENST00000641927 WDR46O15213 610 aaKnown RBP20.28■□□□□ 0.84
PHGDH-230ENST00000641927 GJB2P29033 226 aa20.28■□□□□ 0.84
PHGDH-230ENST00000641927 GJA5P36382 358 aa20.28■□□□□ 0.84
PHGDH-230ENST00000641927 ZNF157P51786 506 aaPredicted RBP20.28■□□□□ 0.84
PHGDH-230ENST00000641927 GADL1Q6ZQY3 521 aa20.28■□□□□ 0.84
PHGDH-230ENST00000641927 FAM184AQ8NB25 1140 aa20.28■□□□□ 0.84
PHGDH-230ENST00000641927 STAT2P52630 851 aa20.27■□□□□ 0.84
PHGDH-230ENST00000641927 HMGN5P82970 282 aaKnown RBP20.27■□□□□ 0.84
PHGDH-230ENST00000641927 SMARCC2Q8TAQ2 1214 aa20.27■□□□□ 0.84
PHGDH-230ENST00000641927 RPAP3Q9H6T3 665 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-230ENST00000641927 ORC3Q9UBD5 711 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-230ENST00000641927 hCG_1642624A0A1W2PR95 340 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 FMNL1O95466 1100 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-230ENST00000641927 FUT2Q10981 343 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 SNAPC2Q13487 334 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 SH3D19Q5HYK7 790 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 C12orf42Q96LP6 360 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 KCNH4Q9UQ05 1017 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 TLL2Q9Y6L7 1015 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 V9GY48 417 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-230ENST00000641927 CNTNAP5Q8WYK1 1306 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 A0A0G2JLL6 359 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-230ENST00000641927 CYTH3O43739 400 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 PRRT2Q7Z6L0 340 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-230ENST00000641927 HOMER1Q86YM7 354 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 SPZ1Q9BXG8 430 aa20.26■□□□□ 0.83
PHGDH-230ENST00000641927 RNF26Q9BY78 433 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-230ENST00000641927 SPRYD7Q5W111 196 aa20.25■□□□□ 0.83
PHGDH-230ENST00000641927 RGMBQ6NW40 437 aa20.25■□□□□ 0.83
PHGDH-230ENST00000641927 ADGRF4Q8IZF3 695 aa20.25■□□□□ 0.83
PHGDH-230ENST00000641927 CHURC1Q8WUH1 139 aa20.25■□□□□ 0.83
PHGDH-230ENST00000641927 KIFC2Q96AC6 838 aa20.25■□□□□ 0.83
PHGDH-230ENST00000641927 FEM1BQ9UK73 627 aa20.25■□□□□ 0.83
PHGDH-230ENST00000641927 KIF3AQ9Y496 699 aa20.25■□□□□ 0.83
PHGDH-230ENST00000641927 PRPF3O43395 683 aaKnown RBP20.24■□□□□ 0.83
PHGDH-230ENST00000641927 FLOT1O75955 427 aa20.24■□□□□ 0.83
PHGDH-230ENST00000641927 ZBTB48P10074 688 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms