RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 C8orf76Q96K31 380 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 ALG1Q9BT22 464 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 SIPA1L1O43166 1804 aa15.21■□□□□ 0.03
PHGDH-221ENST00000641573 MPHOSPH10O00566 681 aaKnown RBP15.2■□□□□ 0.02
PHGDH-221ENST00000641573 PLEKHA8P1O95397 391 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 KIF5BP33176 963 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 GUCY1B3Q02153 619 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 RESTQ13127 1097 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 GRM4Q14833 912 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 CERKLQ49MI3 558 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-221ENST00000641573 TATDN1Q6P1N9 297 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 TMTC3Q6ZXV5 915 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 FAM83AQ86UY5 434 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 WASF1Q92558 559 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 MAP3K14Q99558 947 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 MTMR4Q9NYA4 1195 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 TRIM17Q9Y577 477 aa15.2■□□□□ 0.02
PHGDH-221ENST00000641573 ALDH1A1P00352 501 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 TNNI2P48788 182 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 FUT2Q10981 343 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 OTUD7BQ6GQQ9 843 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 CCDC82Q8N4S0 544 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 RGS22Q8NE09 1264 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 FBXO18Q8NFZ0 1043 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 AIFM3Q96NN9 605 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 CFHR5Q9BXR6 569 aa15.19■□□□□ 0.02
PHGDH-221ENST00000641573 POTEFA5A3E0 1075 aa15.18■□□□□ 0.02
PHGDH-221ENST00000641573 PRPF3O43395 683 aaKnown RBP15.18■□□□□ 0.02
PHGDH-221ENST00000641573 DEXIO95424 95 aa15.18■□□□□ 0.02
PHGDH-221ENST00000641573 AKAP17AQ02040 695 aaKnown RBP15.18■□□□□ 0.02
PHGDH-221ENST00000641573 PPP4R3BQ5MIZ7 849 aa15.18■□□□□ 0.02
PHGDH-221ENST00000641573 SRBD1Q8N5C6 995 aaKnown RBP15.18■□□□□ 0.02
PHGDH-221ENST00000641573 RNF26Q9BY78 433 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-221ENST00000641573 TMEM39BQ9GZU3 492 aa15.18■□□□□ 0.02
PHGDH-221ENST00000641573 ZSCAN16Q9H4T2 348 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-221ENST00000641573 HERC5Q9UII4 1024 aaKnown RBP15.18■□□□□ 0.02
PHGDH-221ENST00000641573 PRPF40AO75400 957 aaKnown RBP15.17■□□□□ 0.02
PHGDH-221ENST00000641573 TTLL1O95922 423 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 GUCY1A2P33402 732 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 GNAQP50148 359 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 DNM1Q05193 864 aaKnown RBP15.17■□□□□ 0.02
PHGDH-221ENST00000641573 PRAMEF18Q5VWM3 479 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.022e-7■■■■□ 19.6
PHGDH-221ENST00000641573 GJB4Q9NTQ9 266 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 LMBRD1Q9NUN5 540 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 MAD2L2Q9UI95 211 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 SCAF8Q9UPN6 1271 aaKnown RBP15.17■□□□□ 0.02
PHGDH-221ENST00000641573 MTMR7Q9Y216 660 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 CNPY2Q9Y2B0 182 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 CNTNAP5Q8WYK1 1306 aa15.17■□□□□ 0.02
PHGDH-221ENST00000641573 MYH8P13535 1937 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 GDF11O95390 407 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 NCLP19338 710 aaKnown RBP15.16■□□□□ 0.02
PHGDH-221ENST00000641573 TNFAIP1Q13829 316 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 TRIM29Q14134 588 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 RASA3Q14644 834 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 ABCB5Q2M3G0 1257 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 KRT40Q6A162 431 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 FAM173BQ6P4H8 233 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 TMEM179Q6ZVK1 233 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 ARMC9Q7Z3E5 817 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 CLEC10AQ8IUN9 316 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 LRRC47Q8N1G4 583 aaKnown RBP15.16■□□□□ 0.02
PHGDH-221ENST00000641573 STAG2Q8N3U4 1231 aa15.16■□□□□ 0.02
PHGDH-221ENST00000641573 V9GY48 417 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-221ENST00000641573 MKI67P46013 3256 aaKnown RBP15.16■□□□□ 0.02
PHGDH-221ENST00000641573 PALM3A6NDB9 673 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-221ENST00000641573 TRAK2O60296 914 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 TBC1D12O60347 775 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 PARP1P09874 1014 aaKnown RBP15.15■□□□□ 0.02
PHGDH-221ENST00000641573 ATP2B2Q01814 1243 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 RRP1BQ14684 758 aaKnown RBP15.15■□□□□ 0.02
PHGDH-221ENST00000641573 SHROOM1Q2M3G4 852 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-221ENST00000641573 OTOP1Q7RTM1 612 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 CDAN1Q8IWY9 1227 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 LZTS2Q9BRK4 669 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 R3HDMLQ9H3Y0 253 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 KANSL2Q9H9L4 492 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 GDPD2Q9HCC8 539 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 CABP5Q9NP86 173 aa15.15■□□□□ 0.02
PHGDH-221ENST00000641573 GREB1LQ9C091 1923 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-221ENST00000641573 hCG_1642624A0A1W2PR95 340 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 USP17L5A8MUK1 530 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 KRT85P78386 507 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 JAG1P78504 1218 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 SEPT2Q15019 361 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 PKN1Q16512 942 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 SKOR2Q2VWA4 1001 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-221ENST00000641573 TMEM87AQ8NBN3 555 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 ERO1AQ96HE7 468 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 TMEM106CQ9BVX2 250 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 NYAP2Q9P242 653 aa15.14■□□□□ 0.01
PHGDH-221ENST00000641573 COLQQ9Y215 455 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-221ENST00000641573 RBBP6Q7Z6E9 1792 aaKnown RBP15.13■□□□□ 0.01
PHGDH-221ENST00000641573 MANSC4A6NHS7 340 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-221ENST00000641573 FIBPO43427 364 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 GH2P01242 217 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 GOLGA8HP0CJ92 632 aa15.13■□□□□ 0.01
PHGDH-221ENST00000641573 EEF2P13639 858 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms