RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 SHTN1A0MZ66 631 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 STXBP3O00186 592 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 CPA1P15085 419 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 HAND2P61296 217 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 CNNM4Q6P4Q7 775 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 CPLX2Q6PUV4 134 aaKnown RBP7.2□□□□□ -1.26
RGPD1-206ENST00000641458 NIPA1Q7RTP0 329 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 TSPY2A6NKD2 308 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 USP17L5A8MUK1 530 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 EDIL3O43854 480 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 DDNO94850 711 aaPredicted RBP7.2□□□□□ -1.26
RGPD1-206ENST00000641458 F13A1P00488 732 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 VEGFAP15692 232 aaPredicted RBP7.2□□□□□ -1.26
RGPD1-206ENST00000641458 PRPHP41219 470 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 MCCD1P59942 119 aaPredicted RBP7.2□□□□□ -1.26
RGPD1-206ENST00000641458 RBM26Q5T8P6 1007 aaKnown RBP7.2□□□□□ -1.26
RGPD1-206ENST00000641458 RABGAP1Q9Y3P9 1069 aa7.2□□□□□ -1.26
RGPD1-206ENST00000641458 PNMA6FA0A0J9YX94 578 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 KIF23Q02241 960 aaPredicted RBP7.19□□□□□ -1.26
RGPD1-206ENST00000641458 TMEM39BQ9GZU3 492 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 MKNK2Q9HBH9 465 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 AS3MTQ9HBK9 375 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 GPHNQ9NQX3 736 aaPredicted RBP7.19□□□□□ -1.26
RGPD1-206ENST00000641458 ZNF536O15090 1300 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 APPP05067 770 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 CALML3P27482 149 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 LMOD1P29536 600 aaPredicted RBP7.19□□□□□ -1.26
RGPD1-206ENST00000641458 HSD17B4P51659 736 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 FSTL1Q12841 308 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 XRRA1Q6P2D8 792 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 USP17L2Q6R6M4 530 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 SLC44A5Q8NCS7 719 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 ARHGEF10LQ9HCE6 1279 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 INCENPQ9NQS7 918 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 ATP6V1DQ9Y5K8 247 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 DOCK5Q9H7D0 1870 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 CCDC69A6NI79 296 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 PPP6R2O75170 966 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 GJB2P29033 226 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 BACE1P56817 501 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 MAP3K9P80192 1104 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 ANGEL2Q5VTE6 544 aaKnown RBP7.19□□□□□ -1.26
RGPD1-206ENST00000641458 SHCBP1Q8NEM2 672 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 A0A1W2PQ27 194 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 A0A1W2PQ64 194 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 A0A1W2PQD8 194 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 GOLGA8BA8MQT2 603 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 MINDY4BA8MYZ0 360 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 LAD1O00515 517 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 SCG2P13521 617 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 EEF2P13639 858 aaKnown RBP7.19□□□□□ -1.26
RGPD1-206ENST00000641458 NKX3-2P78367 333 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 PTPAQ15257 358 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 B3GNT9Q6UX72 402 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 ERO1BQ86YB8 467 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 C4orf32Q8N8J7 132 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 CDCA5Q96FF9 252 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 KAT14Q9H8E8 782 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.19□□□□□ -1.26
RGPD1-206ENST00000641458 SLC38A10Q9HBR0 1119 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 MORF4L1Q9UBU8 362 aa7.19□□□□□ -1.26
RGPD1-206ENST00000641458 BMP15O95972 392 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 SMYD5Q6GMV2 418 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 SAMD7Q7Z3H4 446 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 ANKRD13AQ8IZ07 590 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 MB21D1Q8N884 522 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 JMJD4Q9H9V9 463 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 GGA3Q9NZ52 723 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 PPP1R1BQ9UD71 204 aaPredicted RBP7.18□□□□□ -1.26
RGPD1-206ENST00000641458 GOLGA8AA7E2F4 631 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 NDUFB10O96000 172 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 AP3B2Q13367 1082 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 PPP4R3AQ6IN85 833 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 NAP1L4Q99733 375 aaKnown RBP7.18□□□□□ -1.26
RGPD1-206ENST00000641458 RIC8AQ9NPQ8 531 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 F5H6K3 240 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 OPLAHO14841 1288 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 ZBTB5O15062 677 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 MUTP22033 750 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 KLRC3Q07444 240 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 GOPCQ9HD26 462 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 BCRP11274 1271 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 ICA1Q05084 483 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 NBPF12Q5TAG4 269 aaPredicted RBP7.18□□□□□ -1.26
RGPD1-206ENST00000641458 ARL6IP4Q66PJ3 421 aaKnown RBP7.18□□□□□ -1.26
RGPD1-206ENST00000641458 CATSPERGQ6ZRH7 1159 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 CTCFLQ8NI51 663 aaPredicted RBP7.18□□□□□ -1.26
RGPD1-206ENST00000641458 CCDC12Q8WUD4 166 aaPredicted RBP7.18□□□□□ -1.26
RGPD1-206ENST00000641458 EMILIN3Q9NT22 766 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 SMC3Q9UQE7 1217 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 ABCB11O95342 1321 aa7.18□□□□□ -1.26
RGPD1-206ENST00000641458 PRKCSHP14314 528 aaPredicted RBP7.17□□□□□ -1.26
RGPD1-206ENST00000641458 SYNE3Q6ZMZ3 975 aa7.17□□□□□ -1.26
RGPD1-206ENST00000641458 CCDC148Q8NFR7 591 aa7.17□□□□□ -1.26
RGPD1-206ENST00000641458 ASTN2O75129 1339 aaPredicted RBP7.17□□□□□ -1.26
RGPD1-206ENST00000641458 KIF3CO14782 793 aa7.17□□□□□ -1.26
RGPD1-206ENST00000641458 PARP1P09874 1014 aaKnown RBP7.17□□□□□ -1.26
RGPD1-206ENST00000641458 SSRP1Q08945 709 aaKnown RBP7.17□□□□□ -1.26
RGPD1-206ENST00000641458 FOXR2Q6PJQ5 311 aa7.17□□□□□ -1.26
RGPD1-206ENST00000641458 USP48Q86UV5 1035 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms