RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 SLC1A4P43007 532 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 HMGN5P82970 282 aaKnown RBP10.19□□□□□ -0.78
HLA-B-258ENST00000640615 SSRP1Q08945 709 aaKnown RBP10.19□□□□□ -0.78
HLA-B-258ENST00000640615 ZNF543Q08ER8 600 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 NTRK3Q16288 839 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 MAP3K11Q16584 847 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 ASPRV1Q53RT3 343 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 TMTC3Q6ZXV5 915 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 KCTD1Q719H9 257 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 SPICE1Q8N0Z3 855 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 C2orf69Q8N8R5 385 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 ZNF280CQ8ND82 737 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 SMARCC2Q8TAQ2 1214 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 DCAF4Q8WV16 495 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 PHKBQ93100 1093 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 CLMNQ96JQ2 1002 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 LZTS2Q9BRK4 669 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 WDR18Q9BV38 432 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 SLC26A6Q9BXS9 759 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 VCPKMTQ9H867 229 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 GBA2Q9HCG7 927 aaPredicted RBP10.19□□□□□ -0.78
HLA-B-258ENST00000640615 GPCPD1Q9NPB8 672 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 ORC3Q9UBD5 711 aaPredicted RBP10.19□□□□□ -0.78
HLA-B-258ENST00000640615 SNCAIPQ9Y6H5 919 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 POLR2AP24928 1970 aaKnown RBP10.19□□□□□ -0.78
HLA-B-258ENST00000640615 TRPM7Q96QT4 1865 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 MYH8P13535 1937 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 USP17L10C9JJH3 530 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 KLRF2D3W0D1 207 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 FMNL1O95466 1100 aaPredicted RBP10.18□□□□□ -0.78
HLA-B-258ENST00000640615 SNHG28P0DPA3 235 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 IFNAR1P17181 557 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 CTCFP49711 727 aaPredicted RBP10.18□□□□□ -0.78
HLA-B-258ENST00000640615 FKBP1BP68106 108 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 AKAP17AQ02040 695 aaKnown RBP10.18□□□□□ -0.78
HLA-B-258ENST00000640615 MTMR2Q13614 643 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 LDLRAD1Q5T700 205 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 SRBD1Q8N5C6 995 aaKnown RBP10.18□□□□□ -0.78
HLA-B-258ENST00000640615 PIBF1Q8WXW3 757 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 SLC10A4Q96EP9 437 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 GMCL1Q96IK5 515 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 NUP88Q99567 741 aaPredicted RBP10.18□□□□□ -0.78
HLA-B-258ENST00000640615 UBA5Q9GZZ9 404 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 KIAA1683Q9H0B3 1180 aa10.18□□□□□ -0.78
HLA-B-258ENST00000640615 GREB1LQ9C091 1923 aaPredicted RBP10.17□□□□□ -0.78
HLA-B-258ENST00000640615 BMP3P12645 472 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 FDPSP14324 419 aaKnown RBP10.17□□□□□ -0.78
HLA-B-258ENST00000640615 USP14P54578 494 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 BACE1P56817 501 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 PPATQ06203 517 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 FUT2Q10981 343 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 IKQ13123 557 aaPredicted RBP10.17□□□□□ -0.78
HLA-B-258ENST00000640615 DEFB115Q30KQ5 88 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 KIAA1755Q5JYT7 1200 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 FAM83BQ5T0W9 1011 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 GPATCH4Q5T3I0 446 aaKnown RBP10.17□□□□□ -0.78
HLA-B-258ENST00000640615 CST9Q5W186 159 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 TTBK2Q6IQ55 1244 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 NBPF11Q86T75 865 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 ERO1BQ86YB8 467 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 CNKSR2Q8WXI2 1034 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 OTUD5Q96G74 571 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 CPVLQ9H3G5 476 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 VAT1LQ9HCJ6 419 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 KIF3AQ9Y496 699 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 AFG3L2Q9Y4W6 797 aa10.17□□□□□ -0.78
HLA-B-258ENST00000640615 V9GY48 417 aaPredicted RBP10.17□□□□□ -0.78
HLA-B-258ENST00000640615 hCG_1642624A0A1W2PR95 340 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 SPDYE5A6NIY4 337 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 UNCXA6NJT0 531 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 C19orf81C9J6K1 198 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 TMEM232C9JQI7 657 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 PRPF3O43395 683 aaKnown RBP10.16□□□□□ -0.78
HLA-B-258ENST00000640615 CAPN15O75808 1086 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 SLC16A2P36021 539 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 FOSBP53539 338 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 DGKZQ13574 1117 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 LARP1BQ659C4 914 aaKnown RBP10.16□□□□□ -0.78
HLA-B-258ENST00000640615 WASF1Q92558 559 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 LPAR1Q92633 364 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 OPTNQ96CV9 577 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 RNF26Q9BY78 433 aaPredicted RBP10.16□□□□□ -0.78
HLA-B-258ENST00000640615 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 TMOD4Q9NZQ9 345 aa10.16□□□□□ -0.78
HLA-B-258ENST00000640615 CNTNAP5Q8WYK1 1306 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 WDR33Q9C0J8 1336 aaKnown RBP10.15□□□□□ -0.78
HLA-B-258ENST00000640615 STK36Q9NRP7 1315 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 WDR46O15213 610 aaKnown RBP10.15□□□□□ -0.78
HLA-B-258ENST00000640615 CYTH3O43739 400 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 DEXIO95424 95 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 HSPA8P11142 646 aaKnown RBP10.15□□□□□ -0.78
HLA-B-258ENST00000640615 PDCP20941 246 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 SYT1P21579 422 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 SMARCA1P28370 1054 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 DDIT3P35638 169 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 HMGCS2P54868 508 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 PPIL2Q13356 520 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 SLC35G1Q2M3R5 365 aa10.15□□□□□ -0.78
HLA-B-258ENST00000640615 SYDE2Q5VT97 1194 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms