RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 ZNF280CQ8ND82 737 aa20.65■□□□□ 0.9
SPIN3-238ENST00000640421 KIAA1683Q9H0B3 1180 aa20.65■□□□□ 0.9
SPIN3-238ENST00000640421 AFG3L2Q9Y4W6 797 aa20.65■□□□□ 0.9
SPIN3-238ENST00000640421 CNTNAP5Q8WYK1 1306 aa20.65■□□□□ 0.9
SPIN3-238ENST00000640421 KLRF2D3W0D1 207 aa20.64■□□□□ 0.9
SPIN3-238ENST00000640421 CYTH3O43739 400 aa20.64■□□□□ 0.9
SPIN3-238ENST00000640421 GMCL1Q96IK5 515 aa20.64■□□□□ 0.9
SPIN3-238ENST00000640421 FEZ1Q99689 392 aa20.64■□□□□ 0.9
SPIN3-238ENST00000640421 GBA2Q9HCG7 927 aaPredicted RBP20.64■□□□□ 0.9
SPIN3-238ENST00000640421 GPCPD1Q9NPB8 672 aa20.64■□□□□ 0.9
SPIN3-238ENST00000640421 PTPRFP10586 1907 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 YY1P25490 414 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 SLC1A4P43007 532 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 ASPRV1Q53RT3 343 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 TTBK2Q6IQ55 1244 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 DCAF4Q8WV16 495 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 SH2D4AQ9H788 454 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 GOPCQ9HD26 462 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 PASKQ96RG2 1323 aa20.64■□□□□ 0.89
SPIN3-238ENST00000640421 hCG_1642624A0A1W2PR95 340 aa20.63■□□□□ 0.89
SPIN3-238ENST00000640421 USP17L10C9JJH3 530 aa20.63■□□□□ 0.89
SPIN3-238ENST00000640421 CCDC96Q2M329 555 aa20.63■□□□□ 0.89
SPIN3-238ENST00000640421 ZNF784Q8NCA9 323 aaPredicted RBP20.63■□□□□ 0.89
SPIN3-238ENST00000640421 SLC26A6Q9BXS9 759 aa20.63■□□□□ 0.89
SPIN3-238ENST00000640421 UBA5Q9GZZ9 404 aa20.63■□□□□ 0.89
SPIN3-238ENST00000640421 EMILIN3Q9NT22 766 aa20.63■□□□□ 0.89
SPIN3-238ENST00000640421 BACE1P56817 501 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 PKP1Q13835 747 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 CPLX2Q6PUV4 134 aaKnown RBP20.62■□□□□ 0.89
SPIN3-238ENST00000640421 AIFM3Q96NN9 605 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 AS3MTQ9HBK9 375 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 ORC3Q9UBD5 711 aaPredicted RBP20.62■□□□□ 0.89
SPIN3-238ENST00000640421 MYH6P13533 1939 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 SPDYE5A6NIY4 337 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 CDKL5O76039 1030 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 FMNL1O95466 1100 aaPredicted RBP20.62■□□□□ 0.89
SPIN3-238ENST00000640421 FKBP1BP68106 108 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 OTUD5Q96G74 571 aa20.62■□□□□ 0.89
SPIN3-238ENST00000640421 IRF6O14896 467 aa20.61■□□□□ 0.89
SPIN3-238ENST00000640421 SLC16A2P36021 539 aa20.61■□□□□ 0.89
SPIN3-238ENST00000640421 HMGN5P82970 282 aaKnown RBP20.61■□□□□ 0.89
SPIN3-238ENST00000640421 FAM83BQ5T0W9 1011 aa20.61■□□□□ 0.89
SPIN3-238ENST00000640421 GPATCH4Q5T3I0 446 aaKnown RBP20.61■□□□□ 0.89
SPIN3-238ENST00000640421 ERO1BQ86YB8 467 aa20.61■□□□□ 0.89
SPIN3-238ENST00000640421 CWC22Q9HCG8 908 aaKnown RBP20.61■□□□□ 0.89
SPIN3-238ENST00000640421 STK36Q9NRP7 1315 aa20.61■□□□□ 0.89
SPIN3-238ENST00000640421 BMP3P12645 472 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 GJA5P36382 358 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 GNAQP50148 359 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 HMGCS2P54868 508 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 SSRP1Q08945 709 aaKnown RBP20.6■□□□□ 0.89
SPIN3-238ENST00000640421 C2orf69Q8N8R5 385 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 PIBF1Q8WXW3 757 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 SPZ1Q9BXG8 430 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 ISY1Q9ULR0 285 aaKnown RBP20.6■□□□□ 0.89
SPIN3-238ENST00000640421 V9GY48 417 aaPredicted RBP20.6■□□□□ 0.89
SPIN3-238ENST00000640421 PPATQ06203 517 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 PKN1Q16512 942 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 SMC1BQ8NDV3 1235 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 OPTNQ96CV9 577 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 RNF26Q9BY78 433 aaPredicted RBP20.6■□□□□ 0.89
SPIN3-238ENST00000640421 GJB4Q9NTQ9 266 aa20.6■□□□□ 0.89
SPIN3-238ENST00000640421 VCAM1P19320 739 aa20.59■□□□□ 0.89
SPIN3-238ENST00000640421 RIOX1Q9H6W3 641 aa20.59■□□□□ 0.89
SPIN3-238ENST00000640421 TMEM232C9JQI7 657 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 PRPF3O43395 683 aaKnown RBP20.58■□□□□ 0.89
SPIN3-238ENST00000640421 TOMM70O94826 608 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 SYT1P21579 422 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 FOSBP53539 338 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 USP14P54578 494 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 ADGRF4Q8IZF3 695 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 LPAR1Q92633 364 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 SHISA4Q96DD7 197 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 LZTS2Q9BRK4 669 aa20.58■□□□□ 0.89
SPIN3-238ENST00000640421 UNCXA6NJT0 531 aa20.58■□□□□ 0.88
SPIN3-238ENST00000640421 PPIL2Q13356 520 aa20.58■□□□□ 0.88
SPIN3-238ENST00000640421 TRIM22Q8IYM9 498 aa20.58■□□□□ 0.88
SPIN3-238ENST00000640421 FAM184AQ8NB25 1140 aa20.58■□□□□ 0.88
SPIN3-238ENST00000640421 RBM46Q8TBY0 533 aaKnown RBP20.58■□□□□ 0.88
SPIN3-238ENST00000640421 C12orf42Q96LP6 360 aa20.58■□□□□ 0.88
SPIN3-238ENST00000640421 VAT1LQ9HCJ6 419 aa20.58■□□□□ 0.88
SPIN3-238ENST00000640421 FBXO28Q9NVF7 368 aa20.58■□□□□ 0.88
SPIN3-238ENST00000640421 C19orf81C9J6K1 198 aa20.57■□□□□ 0.88
SPIN3-238ENST00000640421 SMARCA1P28370 1054 aa20.57■□□□□ 0.88
SPIN3-238ENST00000640421 SH3D19Q5HYK7 790 aa20.57■□□□□ 0.88
SPIN3-238ENST00000640421 SLC10A4Q96EP9 437 aa20.57■□□□□ 0.88
SPIN3-238ENST00000640421 JMJD4Q9H9V9 463 aa20.57■□□□□ 0.88
SPIN3-238ENST00000640421 KCNH4Q9UQ05 1017 aa20.57■□□□□ 0.88
SPIN3-238ENST00000640421 LOC285556D6RIA3 1793 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 WDR46O15213 610 aaKnown RBP20.56■□□□□ 0.88
SPIN3-238ENST00000640421 LARP1BQ659C4 914 aaKnown RBP20.56■□□□□ 0.88
SPIN3-238ENST00000640421 BTNL9Q6UXG8 535 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 PIGSQ96S52 555 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 ZDHHC9Q9Y397 364 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 DEXIO95424 95 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 HUNKP57058 714 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 OTUD7BQ6GQQ9 843 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 HOMER1Q86YM7 354 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 ALG1Q9BT22 464 aa20.56■□□□□ 0.88
SPIN3-238ENST00000640421 RPAP3Q9H6T3 665 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms