RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 GOLGA8BA8MQT2 603 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 USP17L10C9JJH3 530 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 PRC1O43663 620 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 KINO60870 393 aaKnown RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 CALML3P27482 149 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 NAP1L1P55209 391 aaKnown RBP6.42□□□□□ -1.38
RTTN-218ENST00000640408 SEPT6Q14141 434 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 LCORLQ8N3X6 602 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 FAM227BQ96M60 508 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 HOXC10Q9NYD6 342 aa6.42□□□□□ -1.38
RTTN-218ENST00000640408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 PARP1P09874 1014 aaKnown RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 CCDC172P0C7W6 258 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 ASPRV1Q53RT3 343 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 SH3RF3Q8TEJ3 882 aaPredicted RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 NUP62CLQ9H1M0 184 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 ARFGAP3Q9NP61 516 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 LIMCH1Q9UPQ0 1083 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 CASTP20810 708 aaKnown RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 U2AF2P26368 475 aaKnown RBP eCLIP6.41□□□□□ -1.381e-5■□□□□ 9.3
RTTN-218ENST00000640408 GTF2A2P52657 109 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 DYNLL1P63167 89 aaKnown RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 TUBB4BP68371 445 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 ODF2Q5BJF6 829 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 WDR78Q5VTH9 848 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 SAMD1Q6SPF0 538 aaPredicted RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 NAP1L4Q99733 375 aaKnown RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 NYAP2Q9P242 653 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 FLT1P17948 1338 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 A0A0D9SFI3 127 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 ZNF500O60304 480 aaPredicted RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 KLRK1P26718 216 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 CDK8P49336 464 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 SNW1Q13573 536 aaKnown RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 MAP3K11Q16584 847 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 APOBEC3HQ6NTF7 200 aaKnown RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 SCYL3Q8IZE3 742 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 SDR42E1Q8WUS8 393 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 PCMTD1Q96MG8 357 aaPredicted RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 TMX1Q9H3N1 280 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 CLIP2Q9UDT6 1046 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 TMEM88BA6NKF7 163 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 URI1O94763 535 aaPredicted RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 ZNF157P51786 506 aaPredicted RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 RTN1Q16799 776 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 FILIP1LQ4L180 1135 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 MAP1SQ66K74 1059 aaPredicted RBP6.41□□□□□ -1.38
RTTN-218ENST00000640408 FAM114A1Q8IWE2 563 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 USP25Q9UHP3 1055 aa6.41□□□□□ -1.38
RTTN-218ENST00000640408 COL5A3P25940 1745 aaPredicted RBP6.4□□□□□ -1.38
RTTN-218ENST00000640408 YDJCA8MPS7 323 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 GNA11P29992 359 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 LIFRP42702 1097 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 GCLCP48506 637 aaPredicted RBP6.4□□□□□ -1.38
RTTN-218ENST00000640408 GRM1Q13255 1194 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 CEP57Q86XR8 500 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 MB21D1Q8N884 522 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 STAG1Q8WVM7 1258 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 CDCA5Q96FF9 252 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 hCG_1984214I3L0E3 225 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 SH3BGRP55822 239 aaPredicted RBP6.4□□□□□ -1.38
RTTN-218ENST00000640408 PRKG1Q13976 671 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 DEFB115Q30KQ5 88 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 SLFN13Q68D06 897 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 CEP57L1Q8IYX8 460 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 OTUD6BQ8N6M0 293 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 ZNF713Q8N859 430 aaPredicted RBP6.4□□□□□ -1.38
RTTN-218ENST00000640408 PARK7Q99497 189 aaKnown RBP6.4□□□□□ -1.38
RTTN-218ENST00000640408 PUS7LQ9H0K6 701 aaKnown RBP6.4□□□□□ -1.38
RTTN-218ENST00000640408 ZNHIT6Q9NWK9 470 aaKnown RBP6.4□□□□□ -1.38
RTTN-218ENST00000640408 PALD1Q9ULE6 856 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 COL1A1P02452 1464 aaPredicted RBP6.4□□□□□ -1.38
RTTN-218ENST00000640408 ZNF541Q9H0D2 1346 aa6.4□□□□□ -1.38
RTTN-218ENST00000640408 DDAH1O94760 285 aa6.4□□□□□ -1.39
RTTN-218ENST00000640408 METAP2P50579 478 aaKnown RBP eCLIP6.4□□□□□ -1.39
RTTN-218ENST00000640408 PPATQ06203 517 aa6.4□□□□□ -1.39
RTTN-218ENST00000640408 BRDTQ58F21 947 aaPredicted RBP6.4□□□□□ -1.39
RTTN-218ENST00000640408 RPUSD2Q8IZ73 545 aaKnown RBP6.4□□□□□ -1.39
RTTN-218ENST00000640408 RRP36Q96EU6 259 aaKnown RBP6.4□□□□□ -1.39
RTTN-218ENST00000640408 ANAPC4Q9UJX5 808 aa6.4□□□□□ -1.39
RTTN-218ENST00000640408 GSG1L2A8MUP6 293 aa6.4□□□□□ -1.39
RTTN-218ENST00000640408 SFPQP23246 707 aaKnown RBP eCLIP6.4□□□□□ -1.39
RTTN-218ENST00000640408 VPS53Q5VIR6 699 aa6.4□□□□□ -1.39
RTTN-218ENST00000640408 ERO1AQ96HE7 468 aa6.4□□□□□ -1.39
RTTN-218ENST00000640408 RREB1Q92766 1687 aa6.4□□□□□ -1.39
RTTN-218ENST00000640408 USP17L15C9J2P7 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP17L13C9JLJ4 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP17L11C9JVI0 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP17L18D6R9N7 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP17L22D6RA61 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP17L17D6RBQ6 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP17L19D6RCP7 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP17L20D6RJB6 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 GCKP35557 465 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 USP17L24Q0WX57 530 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 DBN1Q16643 649 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 CERS5Q8N5B7 392 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 ZNF280CQ8ND82 737 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 DCAF4Q8WV16 495 aa6.39□□□□□ -1.39
RTTN-218ENST00000640408 RIOK1Q9BRS2 568 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms