RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 FRMPD2Q68DX3 1309 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 ATF7P17544 494 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 LRGUKQ96M69 825 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 TBC1D32Q96NH3 1257 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 TSR3Q9UJK0 312 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 CPSF3Q9UKF6 684 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 KIF11P52732 1056 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 RSRC2Q7L4I2 434 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 NLRX1Q86UT6 975 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 DEPTORQ8TB45 409 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 TYRO3Q06418 890 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 AP1ARQ63HQ0 302 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 NELFCDQ8IXH7 590 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 MRFAP1L1Q96HT8 127 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 VCX3AQ9NNX9 186 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 FANCAO15360 1455 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 CTTNBP2NLQ9P2B4 639 aa17.95■□□□□ 0.46
CACNA1A-258ENST00000638029 DLGAP5Q15398 846 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 IL16Q14005 1332 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 SMAP1Q8IYB5 467 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 CCDC13Q8IYE1 715 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 IQUBQ8NA54 791 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 SUCLA2Q9P2R7 463 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 ACTN4O43707 911 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 ZBTB17Q13105 803 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 LRRC59Q96AG4 307 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 HAUS8Q9BT25 410 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 FAF1Q9UNN5 650 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 TMED1Q13445 227 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 RNF113AO15541 343 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 F13A1P00488 732 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 IGHDP01880 384 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 GUCY2FP51841 1108 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 HSPA2P54652 639 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 DENND2CQ68D51 928 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 PARP2Q9UGN5 583 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 RALGAPBQ86X10 1494 aa17.94■□□□□ 0.46
CACNA1A-258ENST00000638029 CYP2J2P51589 502 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 PLCB1Q9NQ66 1216 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 DDX41Q9UJV9 622 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 UHMK1Q8TAS1 419 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 hCG_1642624A0A1W2PR95 340 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 CEP104O60308 925 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 NUDCD3Q8IVD9 361 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 ANKRD36BQ8N2N9 1353 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 GSTA4O15217 222 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 TTC6Q86TZ1 520 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 BICC1Q9H694 974 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 COG4Q9H9E3 785 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 GON4LQ3T8J9 2241 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 A0A1B0GVL5 298 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 TAF5LO75529 589 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 CALCRLQ16602 461 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 ANKRD20A3Q5VUR7 823 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 STAM2O75886 525 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 DLATP10515 647 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 DOK7Q18PE1 504 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 RINLQ6ZS11 566 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 SLC13A4Q9UKG4 626 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 CCDC85BQ15834 202 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 OTUD6AQ7L8S5 288 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 TGFBRAP1Q8WUH2 860 aa17.93■□□□□ 0.46
CACNA1A-258ENST00000638029 TFCP2Q12800 502 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 CREB3L3Q68CJ9 461 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 CNNM4Q6P4Q7 775 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 EIF2AK4Q9P2K8 1649 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 ALAS1P13196 640 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 TSPOAP1O95153 1857 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 ABCB4P21439 1286 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 EVCP57679 992 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 OTUD7BQ6GQQ9 843 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 BRAPQ7Z569 592 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 MAD1L1Q9Y6D9 718 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 IPO11Q9UI26 975 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 RIPOR2Q9Y4F9 1068 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 PFDN6O15212 129 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 EXOC3O60645 756 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 TRMT10CQ7L0Y3 403 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
CACNA1A-258ENST00000638029 ARHGEF6Q15052 776 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 MRFAP1Q9Y605 127 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 DTNBO60941 627 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 CLCN1P35523 988 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 RCN2Q14257 317 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 PDCD2Q16342 344 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 ADPGKQ9BRR6 497 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 DNM3Q9UQ16 869 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 AP5M1Q9H0R1 490 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 AKR1B15C9JRZ8 316 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 HLA-DPA1P20036 260 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 EEF1B2P24534 225 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 OTULINQ96BN8 352 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 PPWD1Q96BP3 646 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 HOOK2Q96ED9 719 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 MBD4O95243 580 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 FAM71BQ8TC56 605 aa17.91■□□□□ 0.46
CACNA1A-258ENST00000638029 PIDD1Q9HB75 910 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms