RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 RPTORQ8N122 1335 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 NDUFB10O96000 172 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 TFRCP02786 760 aaKnown RBP21.11■□□□□ 0.97
PNKP-230ENST00000638016 ERCC3P19447 782 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 CCND3P30281 292 aaPredicted RBP21.11■□□□□ 0.97
PNKP-230ENST00000638016 CACNB2Q08289 660 aaPredicted RBP21.11■□□□□ 0.97
PNKP-230ENST00000638016 GRB14Q14449 540 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 TMEM132BQ14DG7 1078 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 MAP3K21Q5TCX8 1036 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 CHMP4CQ96CF2 233 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 CRISPLD2Q9H0B8 497 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 HMX1Q9NP08 348 aaPredicted RBP21.11■□□□□ 0.97
PNKP-230ENST00000638016 HELLSQ9NRZ9 838 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 NYAP2Q9P242 653 aa21.11■□□□□ 0.97
PNKP-230ENST00000638016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.11■□□□□ 0.97
PNKP-230ENST00000638016 SLC15A5A6NIM6 579 aa21.1■□□□□ 0.97
PNKP-230ENST00000638016 MTMR4Q9NYA4 1195 aa21.1■□□□□ 0.97
PNKP-230ENST00000638016 ALPK3Q96L96 1907 aa21.1■□□□□ 0.97
PNKP-230ENST00000638016 PLIN4Q96Q06 1357 aa21.1■□□□□ 0.97
PNKP-230ENST00000638016 ZNF236Q9UL36 1845 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 F5H6K3 240 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 NMT2O60551 498 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 PDE4AP27815 886 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 TFAP4Q01664 338 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 KLRC3Q07444 240 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 MCMDC2Q4G0Z9 681 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 RASGRP2Q7LDG7 609 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 NCAPG2Q86XI2 1143 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 PPP1R9AQ9ULJ8 1098 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 IVNS1ABPQ9Y6Y0 642 aa21.09■□□□□ 0.97
PNKP-230ENST00000638016 TSPY3P0CV98 308 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 TSPY8P0CW00 308 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 ADORA2AP29274 412 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 PDE4BQ07343 736 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 MB21D1Q8N884 522 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 REPS2Q8NFH8 660 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 NEDD1Q8NHV4 660 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 OSBPL3Q9H4L5 887 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 ADAMTS5Q9UNA0 930 aa21.08■□□□□ 0.97
PNKP-230ENST00000638016 FRMPD3Q5JV73 1810 aa21.08■□□□□ 0.96
PNKP-230ENST00000638016 ZNFX1Q9P2E3 1918 aaKnown RBP21.08■□□□□ 0.96
PNKP-230ENST00000638016 VWA5AO00534 786 aa21.07■□□□□ 0.96
PNKP-230ENST00000638016 COBLO75128 1261 aa21.07■□□□□ 0.96
PNKP-230ENST00000638016 HSPD1P10809 573 aaKnown RBP21.07■□□□□ 0.96
PNKP-230ENST00000638016 SDSP20132 328 aa21.07■□□□□ 0.96
PNKP-230ENST00000638016 CYP2C19P33261 490 aa21.07■□□□□ 0.96
PNKP-230ENST00000638016 MNX1P50219 401 aaPredicted RBP21.07■□□□□ 0.96
PNKP-230ENST00000638016 ZNF287Q9HBT7 754 aa21.07■□□□□ 0.96
PNKP-230ENST00000638016 H0YGN5 161 aa21.06■□□□□ 0.96
PNKP-230ENST00000638016 TTLL1O95922 423 aa21.06■□□□□ 0.96
PNKP-230ENST00000638016 FGAP02671 866 aa21.06■□□□□ 0.96
PNKP-230ENST00000638016 SLC3A2P08195 630 aaKnown RBP21.06■□□□□ 0.96
PNKP-230ENST00000638016 HAND2P61296 217 aa21.06■□□□□ 0.96
PNKP-230ENST00000638016 SHCBP1Q8NEM2 672 aa21.06■□□□□ 0.96
PNKP-230ENST00000638016 DPF3Q92784 378 aa21.06■□□□□ 0.96
PNKP-230ENST00000638016 PAWRQ96IZ0 340 aaKnown RBP21.06■□□□□ 0.96
PNKP-230ENST00000638016 ZNF214Q9UL59 606 aaPredicted RBP21.06■□□□□ 0.96
PNKP-230ENST00000638016 CCDC171Q6TFL3 1326 aa21.05■□□□□ 0.96
PNKP-230ENST00000638016 HOXC6P09630 235 aa21.05■□□□□ 0.96
PNKP-230ENST00000638016 TRPV1Q8NER1 839 aa21.05■□□□□ 0.96
PNKP-230ENST00000638016 MKL1Q969V6 931 aa21.05■□□□□ 0.96
PNKP-230ENST00000638016 SLF1Q9BQI6 1058 aa21.05■□□□□ 0.96
PNKP-230ENST00000638016 NBPF3Q9H094 633 aa21.05■□□□□ 0.96
PNKP-230ENST00000638016 IL17RBQ9NRM6 502 aa21.05■□□□□ 0.96
PNKP-230ENST00000638016 TSPY2A6NKD2 308 aa21.04■□□□□ 0.96
PNKP-230ENST00000638016 ALX1Q15699 326 aa21.04■□□□□ 0.96
PNKP-230ENST00000638016 CWC27Q6UX04 472 aaKnown RBP21.04■□□□□ 0.96
PNKP-230ENST00000638016 DPP9Q86TI2 863 aa21.04■□□□□ 0.96
PNKP-230ENST00000638016 TRMT44Q8IYL2 757 aaKnown RBP21.04■□□□□ 0.96
PNKP-230ENST00000638016 IL25Q9H293 177 aa21.04■□□□□ 0.96
PNKP-230ENST00000638016 ANAPC4Q9UJX5 808 aa21.04■□□□□ 0.96
PNKP-230ENST00000638016 RANBP6O60518 1105 aaKnown RBP21.03■□□□□ 0.96
PNKP-230ENST00000638016 IGHA2P01877 340 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 PGK2P07205 417 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 RRP12Q5JTH9 1297 aaKnown RBP21.03■□□□□ 0.96
PNKP-230ENST00000638016 SLFN13Q68D06 897 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 LHX8Q68G74 356 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 RIOX2Q8IUF8 465 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 TBC1D10CQ8IV04 446 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 KIFC2Q96AC6 838 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 MROH8Q9H579 483 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 PCDH10Q9P2E7 1040 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 OGDHLQ9ULD0 1010 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 MTMR7Q9Y216 660 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 RIPK3Q9Y572 518 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 PLXNA1Q9UIW2 1896 aa21.03■□□□□ 0.96
PNKP-230ENST00000638016 GSPT1P15170 499 aaKnown RBP21.02■□□□□ 0.96
PNKP-230ENST00000638016 STAT3P40763 770 aa21.02■□□□□ 0.96
PNKP-230ENST00000638016 SLC4A3P48751 1232 aa21.02■□□□□ 0.96
PNKP-230ENST00000638016 MFSD14CQ5VZR4 134 aa21.02■□□□□ 0.96
PNKP-230ENST00000638016 GMCL1P1Q8NEA9 526 aa21.02■□□□□ 0.96
PNKP-230ENST00000638016 ISY1Q9ULR0 285 aaKnown RBP21.02■□□□□ 0.96
PNKP-230ENST00000638016 STX8Q9UNK0 236 aa21.02■□□□□ 0.96
PNKP-230ENST00000638016 ORC4O43929 436 aa21.01■□□□□ 0.95
PNKP-230ENST00000638016 PRAMEF19Q5SWL8 479 aa21.01■□□□□ 0.95
PNKP-230ENST00000638016 CPXCR1Q8N123 301 aa21.01■□□□□ 0.95
PNKP-230ENST00000638016 MMP19Q99542 508 aa21.01■□□□□ 0.95
PNKP-230ENST00000638016 HTATIP2Q9BUP3 242 aa21.01■□□□□ 0.95
PNKP-230ENST00000638016 RAVER2Q9HCJ3 691 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms