RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 CPSF2Q9P2I0 782 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-240ENST00000637432 PTPN22Q9Y2R2 807 aa17.84■□□□□ 0.45
CACNA1A-240ENST00000637432 ACEP12821 1306 aa17.84■□□□□ 0.45
CACNA1A-240ENST00000637432 IGSF3O75054 1194 aa17.84■□□□□ 0.45
CACNA1A-240ENST00000637432 USH1CQ9Y6N9 552 aa17.84■□□□□ 0.45
CACNA1A-240ENST00000637432 CCDC13Q8IYE1 715 aa17.83■□□□□ 0.45
CACNA1A-240ENST00000637432 BTN2A2Q8WVV5 523 aa17.83■□□□□ 0.45
CACNA1A-240ENST00000637432 ABHD8Q96I13 439 aa17.83■□□□□ 0.45
CACNA1A-240ENST00000637432 TEKT2Q9UIF3 430 aa17.83■□□□□ 0.45
CACNA1A-240ENST00000637432 SPAG1Q07617 926 aa17.83■□□□□ 0.45
CACNA1A-240ENST00000637432 GOLGA8CPA6NN73 597 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 XKR9Q5GH70 373 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 MIER3Q7Z3K6 550 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 RAD18Q9NS91 495 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 C8orf74Q6P047 294 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 ELMOD1Q8N336 334 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 IQUBQ8NA54 791 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 USP40Q9NVE5 1235 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 ZNF594Q96JF6 807 aaPredicted RBP17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 GNPTABQ3T906 1256 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 KIAA0825Q8IV33 1275 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 RAD50Q92878 1312 aa17.83■□□□□ 0.44
CACNA1A-240ENST00000637432 OSTNP61366 133 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 KCNA1Q09470 495 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 CCDC186Q7Z3E2 898 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 BACH2Q9BYV9 841 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 ZRANB1Q9UGI0 708 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 H3BRJ5 948 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 PTPREP23469 700 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 FAM47AQ5JRC9 791 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 TRIM59Q8IWR1 403 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 ITGA6P23229 1130 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 RAP1GDS1P52306 607 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 CLNS1AP54105 237 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 ARHGAP4P98171 946 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 DMP1Q13316 513 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 ANKRD20A3Q5VUR7 823 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 CSGALNACT2Q8N6G5 542 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 NSUN2Q08J23 767 aaKnown RBP eCLIP17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 CCNYQ8ND76 341 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 VCX3AQ9NNX9 186 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 CLRN2A0PK11 232 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 H7C0C1 242 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 ATP5OP48047 213 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 HIF1AQ16665 826 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 ACCSLQ4AC99 568 aa17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 ATF5Q9Y2D1 282 aaPredicted RBP17.82■□□□□ 0.44
CACNA1A-240ENST00000637432 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 IL15P40933 162 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 RHPN1Q8TCX5 695 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 SNX25Q9H3E2 840 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 AKR1B15C9JRZ8 316 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 PPWD1Q96BP3 646 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 LMNTD2Q8IXW0 634 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 RNF10Q8N5U6 811 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 SUPT20HQ8NEM7 779 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 HESX1Q9UBX0 185 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 DAAM1Q9Y4D1 1078 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 C20orf194Q5TEA3 1177 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 AFAP1L1Q8TED9 768 aa17.81■□□□□ 0.44
CACNA1A-240ENST00000637432 N4BP1O75113 896 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 MYL3P08590 195 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 HLA-DPA1P20036 260 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 FAM71BQ8TC56 605 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 STAMQ92783 540 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 SLC12A6Q9UHW9 1150 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 K7ENM7 598 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 RAB44Q7Z6P3 723 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 HPS4Q9NQG7 708 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 RAB20Q9NX57 234 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 RINT1Q6NUQ1 792 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 NBPF11Q86T75 865 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 SGK1O00141 431 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 DPYSL4O14531 572 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 SPICE1Q8N0Z3 855 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 RPGRIP1Q96KN7 1286 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 TTC1Q99614 292 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 NPHP3Q7Z494 1330 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 CCDC85BQ15834 202 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 DCAF4L1Q3SXM0 396 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 SNX19Q92543 992 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 MYL10Q9BUA6 226 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 PPFIA4O75335 1185 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 TMEM191BP0C7N4 346 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 SLC38A10Q9HBR0 1119 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 MBIPQ9NS73 344 aa17.8■□□□□ 0.44
CACNA1A-240ENST00000637432 PMLP29590 882 aa17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 ADCY7P51828 1080 aa17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 PABPC4Q13310 644 aaKnown RBP eCLIP17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 KRT222Q8N1A0 295 aa17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 LRRC47Q8N1G4 583 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 CCDC127Q96BQ5 260 aa17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 ARHGDIAP52565 204 aa17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 RNF113AO15541 343 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 ANXA13P27216 316 aa17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 POLA2Q14181 598 aa17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 KRT27Q7Z3Y8 459 aa17.79■□□□□ 0.44
CACNA1A-240ENST00000637432 PEX26Q7Z412 305 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms