RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 RIOX1Q9H6W3 641 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 GPCPD1Q9NPB8 672 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 KCNJ14Q9UNX9 436 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 BAZ2BQ9UIF8 2168 aaKnown RBP24.38■■□□□ 1.49
CLN8-213ENST00000637156 IQCA1LA6NCM1 817 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 ADM5C9JUS6 153 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 VAT1LQ9HCJ6 419 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 SYNPO2Q9UMS6 1093 aa24.38■■□□□ 1.49
CLN8-213ENST00000637156 POLR2AP24928 1970 aaKnown RBP24.37■■□□□ 1.49
CLN8-213ENST00000637156 SCG2P13521 617 aa24.37■■□□□ 1.49
CLN8-213ENST00000637156 SLC1A4P43007 532 aa24.37■■□□□ 1.49
CLN8-213ENST00000637156 TRIM29Q14134 588 aa24.37■■□□□ 1.49
CLN8-213ENST00000637156 KRT26Q7Z3Y9 468 aa24.37■■□□□ 1.49
CLN8-213ENST00000637156 GLIS2Q9BZE0 524 aaPredicted RBP24.37■■□□□ 1.49
CLN8-213ENST00000637156 ARHGEF10LQ9HCE6 1279 aa24.37■■□□□ 1.49
CLN8-213ENST00000637156 VPS54Q9P1Q0 977 aa24.37■■□□□ 1.49
CLN8-213ENST00000637156 KIF28PB7ZC32 967 aa24.36■■□□□ 1.49
CLN8-213ENST00000637156 NDUFB10O96000 172 aa24.36■■□□□ 1.49
CLN8-213ENST00000637156 KIAA1755Q5JYT7 1200 aa24.36■■□□□ 1.49
CLN8-213ENST00000637156 GPATCH4Q5T3I0 446 aaKnown RBP24.36■■□□□ 1.49
CLN8-213ENST00000637156 KLRG1Q96E93 195 aa24.36■■□□□ 1.49
CLN8-213ENST00000637156 RBM27Q9P2N5 1060 aaKnown RBP24.36■■□□□ 1.49
CLN8-213ENST00000637156 MMP1P03956 469 aa24.36■■□□□ 1.49
CLN8-213ENST00000637156 KIF23Q02241 960 aaPredicted RBP24.36■■□□□ 1.49
CLN8-213ENST00000637156 DCAF4Q8WV16 495 aa24.36■■□□□ 1.49
CLN8-213ENST00000637156 ZKSCAN4Q969J2 545 aaPredicted RBP24.36■■□□□ 1.49
CLN8-213ENST00000637156 CNPY2Q9Y2B0 182 aa24.36■■□□□ 1.49
CLN8-213ENST00000637156 GMCL1Q96IK5 515 aa24.35■■□□□ 1.49
CLN8-213ENST00000637156 WRNIP1Q96S55 665 aa24.35■■□□□ 1.49
CLN8-213ENST00000637156 GDPD2Q9HCC8 539 aa24.35■■□□□ 1.49
CLN8-213ENST00000637156 GINM1Q9NU53 330 aa24.35■■□□□ 1.49
CLN8-213ENST00000637156 SSC5DA1L4H1 1573 aa24.35■■□□□ 1.49
CLN8-213ENST00000637156 USP2O75604 605 aaPredicted RBP24.34■■□□□ 1.49
CLN8-213ENST00000637156 SLC16A2P36021 539 aa24.34■■□□□ 1.49
CLN8-213ENST00000637156 CCDC96Q2M329 555 aa24.34■■□□□ 1.49
CLN8-213ENST00000637156 EAPPQ56P03 285 aaPredicted RBP24.34■■□□□ 1.49
CLN8-213ENST00000637156 USP48Q86UV5 1035 aa24.34■■□□□ 1.49
CLN8-213ENST00000637156 SPICE1Q8N0Z3 855 aa24.34■■□□□ 1.49
CLN8-213ENST00000637156 NUP88Q99567 741 aaPredicted RBP24.34■■□□□ 1.49
CLN8-213ENST00000637156 MYH4Q9Y623 1939 aa24.34■■□□□ 1.49
CLN8-213ENST00000637156 PNMA8AQ86V59 439 aaPredicted RBP24.34■■□□□ 1.49
CLN8-213ENST00000637156 ADGRF4Q8IZF3 695 aa24.34■■□□□ 1.49
CLN8-213ENST00000637156 PIGSQ96S52 555 aa24.34■■□□□ 1.49
CLN8-213ENST00000637156 PHF20Q9BVI0 1012 aa24.34■■□□□ 1.49
CLN8-213ENST00000637156 TFIP11Q9UBB9 837 aaKnown RBP24.34■■□□□ 1.49
CLN8-213ENST00000637156 DDX11L8A8MPP1 907 aa24.33■■□□□ 1.49
CLN8-213ENST00000637156 BTBD18B2RXH4 712 aa24.33■■□□□ 1.49
CLN8-213ENST00000637156 PRPF40AO75400 957 aaKnown RBP24.33■■□□□ 1.49
CLN8-213ENST00000637156 XBP1P17861 261 aa24.33■■□□□ 1.49
CLN8-213ENST00000637156 U2AF2P26368 475 aaKnown RBP eCLIP24.33■■□□□ 1.494e-7■■■■■ 30.7
CLN8-213ENST00000637156 PRKG1Q13976 671 aa24.33■■□□□ 1.49
CLN8-213ENST00000637156 JMJD4Q9H9V9 463 aa24.33■■□□□ 1.49
CLN8-213ENST00000637156 LMBRD1Q9NUN5 540 aa24.33■■□□□ 1.49
CLN8-213ENST00000637156 HOMER1Q86YM7 354 aa24.32■■□□□ 1.48
CLN8-213ENST00000637156 SCYL3Q8IZE3 742 aa24.32■■□□□ 1.48
CLN8-213ENST00000637156 GPKOWQ92917 476 aaPredicted RBP eCLIP24.32■■□□□ 1.48
CLN8-213ENST00000637156 RRP36Q96EU6 259 aaKnown RBP24.32■■□□□ 1.48
CLN8-213ENST00000637156 GOLGA6L22H0YM25 854 aa24.32■■□□□ 1.48
CLN8-213ENST00000637156 TYW1BQ6NUM6 668 aa24.32■■□□□ 1.48
CLN8-213ENST00000637156 DIS3L2Q8IYB7 885 aaKnown RBP24.32■■□□□ 1.48
CLN8-213ENST00000637156 VCPKMTQ9H867 229 aa24.32■■□□□ 1.48
CLN8-213ENST00000637156 POTEIP0CG38 1075 aa24.31■■□□□ 1.48
CLN8-213ENST00000637156 POTEJP0CG39 1038 aa24.31■■□□□ 1.48
CLN8-213ENST00000637156 BMP3P12645 472 aa24.31■■□□□ 1.48
CLN8-213ENST00000637156 NCLP19338 710 aaKnown RBP24.31■■□□□ 1.48
CLN8-213ENST00000637156 NPY5RQ15761 445 aa24.31■■□□□ 1.48
CLN8-213ENST00000637156 WWC2Q6AWC2 1192 aa24.31■■□□□ 1.48
CLN8-213ENST00000637156 OXER1Q8TDS5 423 aa24.31■■□□□ 1.48
CLN8-213ENST00000637156 GOPCQ9HD26 462 aa24.31■■□□□ 1.48
CLN8-213ENST00000637156 USP17L10C9JJH3 530 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 ZYXQ15942 572 aaKnown RBP24.3■■□□□ 1.48
CLN8-213ENST00000637156 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.3■■□□□ 1.48
CLN8-213ENST00000637156 SH3GLB2Q9NR46 395 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 BARHL2Q9NY43 387 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 PTPRAP18433 802 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 KRT85P78386 507 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 SAFBQ15424 915 aaKnown RBP eCLIP24.3■■□□□ 1.48
CLN8-213ENST00000637156 BRAPQ7Z569 592 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 MTMR8Q96EF0 704 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 FOXP1Q9H334 677 aaPredicted RBP24.3■■□□□ 1.48
CLN8-213ENST00000637156 SH2D4AQ9H788 454 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 RRAGCQ9HB90 399 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 ISY1Q9ULR0 285 aaKnown RBP24.3■■□□□ 1.48
CLN8-213ENST00000637156 SCN4AP35499 1836 aa24.3■■□□□ 1.48
CLN8-213ENST00000637156 TMEM232C9JQI7 657 aa24.29■■□□□ 1.48
CLN8-213ENST00000637156 NR5A1Q13285 461 aa24.29■■□□□ 1.48
CLN8-213ENST00000637156 CDCA5Q96FF9 252 aa24.29■■□□□ 1.48
CLN8-213ENST00000637156 WDR90Q96KV7 1748 aa24.29■■□□□ 1.48
CLN8-213ENST00000637156 STXBP3O00186 592 aa24.28■■□□□ 1.48
CLN8-213ENST00000637156 ADAMTS3O15072 1205 aa24.28■■□□□ 1.48
CLN8-213ENST00000637156 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.28■■□□□ 1.48
CLN8-213ENST00000637156 HEATR3Q7Z4Q2 680 aa24.28■■□□□ 1.48
CLN8-213ENST00000637156 SEC63Q9UGP8 760 aaKnown RBP24.28■■□□□ 1.48
CLN8-213ENST00000637156 FIBPO43427 364 aa24.28■■□□□ 1.48
CLN8-213ENST00000637156 PPP1R12BO60237 982 aaPredicted RBP24.28■■□□□ 1.48
CLN8-213ENST00000637156 MYSM1Q5VVJ2 828 aa24.28■■□□□ 1.48
CLN8-213ENST00000637156 BTNL9Q6UXG8 535 aa24.28■■□□□ 1.48
CLN8-213ENST00000637156 KIAA1683Q9H0B3 1180 aa24.28■■□□□ 1.48
CLN8-213ENST00000637156 PICK1Q9NRD5 415 aa24.28■■□□□ 1.48
CLN8-213ENST00000637156 CLEC11AQ9Y240 323 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms