RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 ME1P48163 572 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 CERKLQ49MI3 558 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 FOXP4Q8IVH2 680 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 ANKS1AQ92625 1134 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 PHKBQ93100 1093 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 UBAC1Q9BSL1 405 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 RRAGCQ9HB90 399 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 STX8Q9UNK0 236 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 BAZ2BQ9UIF8 2168 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 PTPDC1A2A3K4 754 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 MMP14P50281 582 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 TRIM29Q14134 588 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 IFIT1BQ5T764 474 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 LRRC47Q8N1G4 583 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 ZKSCAN4Q969J2 545 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 ZSCAN16Q9H4T2 348 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 USP25Q9UHP3 1055 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 NID2Q14112 1375 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 hCG_1642624A0A1W2PR95 340 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 TRAF5O00463 557 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 ADAMTS3O15072 1205 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 TBC1D12O60347 775 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 CKAP2LQ8IYA6 745 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 CCDC82Q8N4S0 544 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 CRACR2BQ8N4Y2 399 aaPredicted RBP9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 ACER1Q8TDN7 264 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 TMOD2Q9NZR1 351 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 SWAP70Q9UH65 585 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 CLEC11AQ9Y240 323 aa9.49□□□□□ -0.89
CACNA1A-232ENST00000636966 ERICH2A1L162 156 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 CYTH3O43739 400 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 SLC3A2P08195 630 aaKnown RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 GOLGA8HP0CJ92 632 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 SMARCC2Q8TAQ2 1214 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 MAD2L2Q9UI95 211 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 GOLGA6L6A8MZA4 724 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 EEF2P13639 858 aaKnown RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 CLCN1P35523 988 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 PRKG1Q13976 671 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 STK38Q15208 465 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 EAPPQ56P03 285 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 IQCA1Q86XH1 822 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 DGKHQ86XP1 1220 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 C8orf76Q96K31 380 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 MTMR7Q9Y216 660 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 RLFQ13129 1914 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 MYH4Q9Y623 1939 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 GOLGA6L19H0YKK7 550 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 MPHOSPH10O00566 681 aaKnown RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 KINO60870 393 aaKnown RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 LMOD1P29536 600 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 MAP1SQ66K74 1059 aaPredicted RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 AMOTL1Q8IY63 956 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 SRBD1Q8N5C6 995 aaKnown RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 PNMA1Q8ND90 353 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 DACT1Q9NYF0 836 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 CLIP2Q9UDT6 1046 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 HERC5Q9UII4 1024 aaKnown RBP9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 SLC12A7Q9Y666 1083 aa9.48□□□□□ -0.89
CACNA1A-232ENST00000636966 PTPRFP10586 1907 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 USP17L5A8MUK1 530 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 CAP2P40123 477 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 SART3Q15020 963 aaKnown RBP9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 USP50Q70EL3 339 aaPredicted RBP9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 FANCBQ8NB91 859 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 SDF4Q9BRK5 362 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 LLPHQ9BRT6 129 aaKnown RBP9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 ORC3Q9UBD5 711 aaPredicted RBP9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 BECN2A8MW95 431 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 ZBTB43O43298 467 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 USP2O75604 605 aaPredicted RBP9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 ABCB5Q2M3G0 1257 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 NUP133Q8WUM0 1156 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 MTA3Q9BTC8 594 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 MKI67P46013 3256 aaKnown RBP9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 PITPNM2Q9BZ72 1349 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 METAP2P50579 478 aaKnown RBP eCLIP9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 KRT26Q7Z3Y9 468 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 PPP1R9BQ96SB3 815 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 ZNF112Q9UJU3 913 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 ZBTB21Q9ULJ3 1066 aa9.47□□□□□ -0.89
CACNA1A-232ENST00000636966 KLRG1Q96E93 195 aa9.46□□□□□ -0.89
CACNA1A-232ENST00000636966 DDX19AQ9NUU7 478 aaKnown RBP9.46□□□□□ -0.89
CACNA1A-232ENST00000636966 DOCK1Q14185 1865 aa9.46□□□□□ -0.89
CACNA1A-232ENST00000636966 LRRC37A2A6NM11 1700 aa9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 CCDC69A6NI79 296 aa9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 PDHBP11177 359 aa9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 PKN1Q16512 942 aa9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 OTUD7BQ6GQQ9 843 aa9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 APOBEC3FQ8IUX4 373 aaKnown RBP9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 TMEM87AQ8NBN3 555 aa9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 SPOCK2Q92563 424 aa9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 NUP88Q99567 741 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 CDKL5O76039 1030 aa9.46□□□□□ -0.9
CACNA1A-232ENST00000636966 SNHG28P0DPA3 235 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms