RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 MORF4L1Q9UBU8 362 aa9.66□□□□□ -0.86
PNKP-226ENST00000636840 PHIPQ8WWQ0 1821 aa9.66□□□□□ -0.86
PNKP-226ENST00000636840 TNPO2O14787 897 aaKnown RBP9.65□□□□□ -0.86
PNKP-226ENST00000636840 IFIT3O14879 490 aaKnown RBP9.65□□□□□ -0.86
PNKP-226ENST00000636840 NMT2O60551 498 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 NDUFB10O96000 172 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 MCCP23508 829 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 ERVK-9P63128 1117 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 ERVK-24P63145 666 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 PLS1Q14651 629 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 IFIT1BQ5T764 474 aaKnown RBP9.65□□□□□ -0.86
PNKP-226ENST00000636840 CREB3L3Q68CJ9 461 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 LRRC47Q8N1G4 583 aaKnown RBP9.65□□□□□ -0.86
PNKP-226ENST00000636840 RAET1EQ8TD07 263 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 DCAF4Q8WV16 495 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 GMCL1Q96IK5 515 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 SLF1Q9BQI6 1058 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 TMEM47Q9BQJ4 181 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 ZKSCAN3Q9BRR0 538 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 MCOLN1Q9GZU1 580 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 IVNS1ABPQ9Y6Y0 642 aa9.65□□□□□ -0.86
PNKP-226ENST00000636840 NEDD4P46934 1319 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 ADGRA2Q96PE1 1338 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
PNKP-226ENST00000636840 TMEM232C9JQI7 657 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 SLC27A2O14975 620 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 STRNO43815 780 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 ECM2O94769 699 aaPredicted RBP9.64□□□□□ -0.87
PNKP-226ENST00000636840 SLC25A27O95847 323 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 HMGB1P09429 215 aaKnown RBP9.64□□□□□ -0.87
PNKP-226ENST00000636840 MCM5P33992 734 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 COPB2P35606 906 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 NOVP48745 357 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 STAT2P52630 851 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 NECTIN1Q15223 517 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 CCDC96Q2M329 555 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 GPATCH4Q5T3I0 446 aaKnown RBP9.64□□□□□ -0.87
PNKP-226ENST00000636840 WDR78Q5VTH9 848 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 ANKS1AQ92625 1134 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 MTA3Q9BTC8 594 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 NBPF3Q9H094 633 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 SLC5A4Q9NY91 659 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 SRRDQ9UH36 339 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 PNMA2Q9UL42 364 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 PPP1R9AQ9ULJ8 1098 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 PTPN22Q9Y2R2 807 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 LAMB1P07942 1786 aa9.64□□□□□ -0.87
PNKP-226ENST00000636840 TNKSO95271 1327 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 PTPRFP10586 1907 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 PLA2G6O60733 806 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 PSMA5P28066 241 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 STAT3P40763 770 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 WTAPQ15007 396 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 Q3C1V9 767 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 TSGA10IPQ3SY00 556 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 TMEM67Q5HYA8 995 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 KIAA1755Q5JYT7 1200 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 SYNE3Q6ZMZ3 975 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 PLEKHH3Q7Z736 793 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 PNMA1Q8ND90 353 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 ATG4CQ96DT6 458 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 TMEM87BQ96K49 555 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 TRIM47Q96LD4 638 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 NEK1Q96PY6 1258 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 NUP88Q99567 741 aaPredicted RBP9.63□□□□□ -0.87
PNKP-226ENST00000636840 NUDT12Q9BQG2 462 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 SPATC1LQ9H0A9 340 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 MROH8Q9H579 483 aa9.63□□□□□ -0.87
PNKP-226ENST00000636840 BIN2Q9UBW5 565 aaPredicted RBP9.63□□□□□ -0.87
PNKP-226ENST00000636840 VWA5AO00534 786 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 FGD1P98174 961 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 NFXL1Q6ZNB6 911 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 KCTD1Q719H9 257 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 CATIPQ7Z7H3 387 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 NCAPG2Q86XI2 1143 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 TRMT44Q8IYL2 757 aaKnown RBP9.62□□□□□ -0.87
PNKP-226ENST00000636840 SHCBP1Q8NEM2 672 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 CHMP4CQ96CF2 233 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 ARHGAP39Q9C0H5 1083 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 TXNRD2Q9NNW7 524 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 GPCPD1Q9NPB8 672 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 FBXO28Q9NVF7 368 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 BTBD7Q9P203 1132 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 ADAMTS5Q9UNA0 930 aa9.62□□□□□ -0.87
PNKP-226ENST00000636840 CCDC69A6NI79 296 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 SLC15A5A6NIM6 579 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 PRC1O43663 620 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 PARP1P09874 1014 aaKnown RBP9.61□□□□□ -0.87
PNKP-226ENST00000636840 FCER1AP12319 257 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 OAZ1P54368 228 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 UBXN2AP68543 259 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 TRAF1Q13077 416 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 SLC9C1Q4G0N8 1177 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 ASPRV1Q53RT3 343 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 CYB5R4Q7L1T6 521 aa9.61□□□□□ -0.87
PNKP-226ENST00000636840 DPP9Q86TI2 863 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms