RNA–Protein interactions for RNA: ENST00000636380.1

CACNB4-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,756 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-223	ENST00000636380	KIF4B	Q2VIQ3	1234 aa		7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	LCE2D	Q5TA82	110 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	CLEC10A	Q8IUN9	316 aa		7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	LRRC47	Q8N1G4	583 aa	Known RBP	7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	MKL1	Q969V6	931 aa		7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	VAT1L	Q9HCJ6	419 aa		7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	GPCPD1	Q9NPB8	672 aa		7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	RNF181	Q9P0P0	153 aa		7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	MYH1	P12882	1939 aa		7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	COL2A1	P02458	1487 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	CEP350	Q5VT06	3117 aa		7.75	□□□□□ -1.17
CACNB4-223	ENST00000636380	LAMB1	P07942	1786 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	ADAMTSL1	Q8N6G6	1762 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	KIF28P	B7ZC32	967 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	GALR2	O43603	387 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	GH2	P01242	217 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	MMP1	P03956	469 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	SCG2	P13521	617 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	SMARCA1	P28370	1054 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	NLRP5	P59047	1200 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	UBE2H	P62256	183 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	CEBPZ	Q03701	1054 aa	Known RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	RRP1B	Q14684	758 aa	Known RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	PFKFB3	Q16875	520 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	SHROOM1	Q2M3G4	852 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	ASPRV1	Q53RT3	343 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	MIGA2	Q7L4E1	593 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	GPT2	Q8TD30	523 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	LEO1	Q8WVC0	666 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	UBA5	Q9GZZ9	404 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	GPRC5D	Q9NZD1	345 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	VPS54	Q9P1Q0	977 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	PGAP2	Q9UHJ9	254 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	HACL1	Q9UJ83	578 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	RCOR1	Q9UKL0	485 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	BRCA1	P38398	1863 aa	Known RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	CNTNAP5	Q8WYK1	1306 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	ZNF646	O15015	1829 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	GOLGA6L4	A6NEF3	574 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	BTBD18	B2RXH4	712 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	RAD21	O60216	631 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	DDN	O94850	711 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	PDHB	P11177	359 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	U2AF2	P26368	475 aa	Known RBP eCLIP	7.74	□□□□□ -1.17	4e-6	■■□□□ 13.2
CACNB4-223	ENST00000636380	EPS15	P42566	896 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	JAG1	P78504	1218 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	MAP3K10	Q02779	954 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	ICA1	Q05084	483 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	GSE1	Q14687	1217 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	SLC35G1	Q2M3R5	365 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	MYSM1	Q5VVJ2	828 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	C9orf131	Q5VYM1	1079 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	SIAH1	Q8IUQ4	282 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	DIS3L2	Q8IYB7	885 aa	Known RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	SPOCK2	Q92563	424 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	RRP36	Q96EU6	259 aa	Known RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	USP28	Q96RU2	1077 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	SPZ1	Q9BXG8	430 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	FOXP1	Q9H334	677 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	BRMS1	Q9HCU9	246 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	RTEL1	Q9NZ71	1219 aa		7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	SCAF8	Q9UPN6	1271 aa	Known RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	DDX60L	Q5H9U9	1706 aa	Known RBP	7.74	□□□□□ -1.17
CACNB4-223	ENST00000636380	ASTN2	O75129	1339 aa	Predicted RBP	7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	FRMPD2	Q68DX3	1309 aa	Predicted RBP	7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	CDK5RAP2	Q96SN8	1893 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	CYTH3	O43739	400 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	SNHG28	P0DPA3	235 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	VEGFA	P15692	232 aa	Predicted RBP	7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	KRT2	P35908	639 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	CAP2	P40123	477 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	ZNF543	Q08ER8	600 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	CCDC96	Q2M329	555 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	GPATCH4	Q5T3I0	446 aa	Known RBP	7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	SLFN13	Q68D06	897 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	CAVIN1	Q6NZI2	390 aa	Known RBP	7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	CDAN1	Q8IWY9	1227 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	TRPM4	Q8TD43	1214 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	DCAF4	Q8WV16	495 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	PHF20	Q9BVI0	1012 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	DEFB129	Q9H1M3	183 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	CPVL	Q9H3G5	476 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	SH3GLB2	Q9NR46	395 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	ISY1	Q9ULR0	285 aa	Known RBP	7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	ELP1	O95163	1332 aa		7.73	□□□□□ -1.17
CACNB4-223	ENST00000636380	PSME4	Q14997	1843 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380		F5H6K3	240 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	CALML3	P27482	149 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	LMOD1	P29536	600 aa	Predicted RBP	7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	KLRC3	Q07444	240 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	STK38	Q15208	465 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	SF3A1	Q15459	793 aa	Known RBP	7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	ANGEL2	Q5VTE6	544 aa	Known RBP	7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	ANO1	Q5XXA6	986 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	TTBK2	Q6IQ55	1244 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	DPY19L2	Q6NUT2	758 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	KCTD1	Q719H9	257 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	RASGRP2	Q7LDG7	609 aa		7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	APOBEC3F	Q8IUX4	373 aa	Known RBP	7.72	□□□□□ -1.17
CACNB4-223	ENST00000636380	NOSTRIN	Q8IVI9	506 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms