RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 PRKRIP1Q9H875 184 aaPredicted RBP3.47□□□□□ -1.85
CD46-219ENST00000636114 GMIPQ9P107 970 aa3.47□□□□□ -1.85
CD46-219ENST00000636114 KLHL3Q9UH77 587 aa3.47□□□□□ -1.85
CD46-219ENST00000636114 ZNRF3Q9ULT6 936 aa3.47□□□□□ -1.85
CD46-219ENST00000636114 USP47Q96K76 1375 aa3.46□□□□□ -1.85
CD46-219ENST00000636114 MAGI2Q86UL8 1455 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 IQGAP3Q86VI3 1631 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 POLR1AO95602 1720 aaPredicted RBP3.46□□□□□ -1.86
CD46-219ENST00000636114 FAM170BA6NMN3 283 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 ITGB7P26010 798 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 SOX9P48436 509 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 ZC3H6P61129 1189 aaKnown RBP3.46□□□□□ -1.86
CD46-219ENST00000636114 CLCQ05315 142 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 LRRFIP1Q32MZ4 808 aaKnown RBP3.46□□□□□ -1.86
CD46-219ENST00000636114 TOP6BLQ8N6T0 577 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 CYB5D2Q8WUJ1 264 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 SEC16BQ96JE7 1060 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 TINF2Q9BSI4 451 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 CAPN10Q9HC96 672 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 EFR3BQ9Y2G0 817 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 KIF7Q2M1P5 1343 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 FANCAO15360 1455 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 NEURL4Q96JN8 1562 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 ABCA9Q8IUA7 1624 aa3.46□□□□□ -1.86
CD46-219ENST00000636114 EIF2AK4Q9P2K8 1649 aaKnown RBP3.46□□□□□ -1.86
CD46-219ENST00000636114 LEFTY1O75610 366 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 RALBP1Q15311 655 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 ZNF746Q6NUN9 644 aaPredicted RBP3.45□□□□□ -1.86
CD46-219ENST00000636114 LETMD1Q6P1Q0 360 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 VPS37DQ86XT2 251 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 SHISA5Q8N114 240 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 TMEM40Q8WWA1 233 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 FERD3LQ96RJ6 166 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 MIPEPQ99797 713 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 GINM1Q9NU53 330 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 GPRASP1Q5JY77 1395 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 DHX29Q7Z478 1369 aaKnown RBP3.45□□□□□ -1.86
CD46-219ENST00000636114 ERCC6L2Q5T890 1561 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 CFAP74Q9C0B2 1584 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 MEIS3P2A8K0S8 358 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 UPK3BL1B0FP48 263 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 UPK3BL2E5RIL1 263 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 DNAJA2O60884 412 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 SLITRK5O94991 958 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 LAMC1P11047 1609 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 KDM5CP41229 1560 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 TMF1P82094 1093 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 FBXW10Q5XX13 1052 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 ZNF518AQ6AHZ1 1483 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 OVOS1Q6IE37 1185 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 XAGE3Q8WTP9 111 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 PIM2Q9P1W9 311 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 GTF2IRD1Q9UHL9 959 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 STRIP2Q9ULQ0 834 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 RNF112Q9ULX5 631 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 PPT2Q9UMR5 302 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 LEMD3Q9Y2U8 911 aa3.45□□□□□ -1.86
CD46-219ENST00000636114 ADGRL1O94910 1474 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 ASXL2Q76L83 1435 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 PRAG1Q86YV5 1406 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 SCAPERQ9BY12 1400 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 TRAPPC8Q9Y2L5 1435 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 PRR19A6NJB7 356 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 SLC22A31A6NKX4 558 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 CHURC1-FNTBB4DL54 471 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 TGFB1P01137 390 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 FOSL1P15407 271 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 RAG1P15918 1043 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 ATF4P18848 351 aaPredicted RBP3.44□□□□□ -1.86
CD46-219ENST00000636114 GRIK1P39086 918 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 NASPP49321 788 aaPredicted RBP3.44□□□□□ -1.86
CD46-219ENST00000636114 CDCP2Q5VXM1 449 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 NLRC3Q7RTR2 1065 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 PHACTR4Q8IZ21 702 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 SLC43A3Q8NBI5 491 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 C8orf37Q96NL8 207 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 PRDM5Q9NQX1 630 aaPredicted RBP3.44□□□□□ -1.86
CD46-219ENST00000636114 TPX2Q9ULW0 747 aaKnown RBP3.44□□□□□ -1.86
CD46-219ENST00000636114 MAPK8IP1Q9UQF2 711 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 PTPRTO14522 1441 aa3.44□□□□□ -1.86
CD46-219ENST00000636114 ST20-MTHFSA0A0A6YYL1 179 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 IGF2BP3O00425 579 aaKnown RBP eCLIP3.43□□□□□ -1.86
CD46-219ENST00000636114 CYP26A1O43174 497 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 EOMESO95936 686 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 CYP7A1P22680 504 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 CCNFP41002 786 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 ETV3P41162 512 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 ARID5AQ03989 594 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 ARSHQ5FYA8 562 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 INTS5Q6P9B9 1019 aaKnown RBP3.43□□□□□ -1.86
CD46-219ENST00000636114 CCDC81Q6ZN84 652 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 AFAP1Q8N556 730 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 RBBP8NLQ8NC74 664 aaPredicted RBP3.43□□□□□ -1.86
CD46-219ENST00000636114 ATG4CQ96DT6 458 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 COX4I2Q96KJ9 171 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 CCDC74BQ96LY2 380 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 CRBNQ96SW2 442 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 TM9SF2Q99805 663 aa3.43□□□□□ -1.86
CD46-219ENST00000636114 SRRTQ9BXP5 876 aaKnown RBP3.43□□□□□ -1.86
CD46-219ENST00000636114 CNNM2Q9H8M5 875 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms