RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 HHIPL1Q96JK4 782 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 ARHGEF10LQ9HCE6 1279 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 VAT1LQ9HCJ6 419 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 FAM217BQ9NTX9 383 aaPredicted RBP10□□□□□ -0.81
CDKL5-209ENST00000635828 MAD2L2Q9UI95 211 aa10□□□□□ -0.81
CDKL5-209ENST00000635828 KLF18A0A0U1RQI7 1052 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 CYTH3O43739 400 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 GTF2A2P52657 109 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 NFXL1Q6ZNB6 911 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 ASCC2Q9H1I8 757 aaPredicted RBP9.99□□□□□ -0.81
CDKL5-209ENST00000635828 KAT14Q9H8E8 782 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 CPA4Q9UI42 421 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 CYP46A1Q9Y6A2 500 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 TMEM232C9JQI7 657 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 CTGFP29279 349 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 APOA5Q6Q788 366 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 ZNF654Q8IZM8 581 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 ATG4CQ96DT6 458 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 TOP1P11387 765 aaKnown RBP9.99□□□□□ -0.81
CDKL5-209ENST00000635828 SLC1A4P43007 532 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 NOGQ13253 232 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 SH3D19Q5HYK7 790 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 DGKHQ86XP1 1220 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 ARHGAP39Q9C0H5 1083 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 AS3MTQ9HBK9 375 aa9.99□□□□□ -0.81
CDKL5-209ENST00000635828 DDX49Q9Y6V7 483 aaKnown RBP9.99□□□□□ -0.81
CDKL5-209ENST00000635828 CASP8AP2Q9UKL3 1982 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 CXCL11O14625 94 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 FLOT1O75955 427 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 PCP11498 1178 aaKnown RBP9.98□□□□□ -0.81
CDKL5-209ENST00000635828 FGD1P98174 961 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 ME3Q16798 604 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 CCDC96Q2M329 555 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 RNF186Q9NXI6 227 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 BTBD7Q9P203 1132 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 KRT32Q14532 448 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 ANKRD13CQ8N6S4 541 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 AGTPBP1Q9UPW5 1226 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 TESPA1A2RU30 521 aaPredicted RBP9.98□□□□□ -0.81
CDKL5-209ENST00000635828 ADAMTS3O15072 1205 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 CETPP11597 493 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 TM4SF4P48230 202 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 CATSPERGQ6ZRH7 1159 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 PHKBQ93100 1093 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 PAGR1Q9BTK6 254 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 AGXT2Q9BYV1 514 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 GJB4Q9NTQ9 266 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 RIPK3Q9Y572 518 aa9.98□□□□□ -0.81
CDKL5-209ENST00000635828 SPDYE16A6NNV3 312 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-209ENST00000635828 PDIA3P30101 505 aaKnown RBP9.97□□□□□ -0.81
CDKL5-209ENST00000635828 SRBD1Q8N5C6 995 aaKnown RBP9.97□□□□□ -0.81
CDKL5-209ENST00000635828 TMOD4Q9NZQ9 345 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 ERICH2A1L162 156 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 SNHG28P0DPA3 235 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 BMP3P12645 472 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 ANAPC15P60006 121 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 SCRN1Q12765 414 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 GMCL1P1Q8NEA9 526 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 ANKS1AQ92625 1134 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 THSD7BQ9C0I4 1608 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 MYH6P13533 1939 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 CCDC69A6NI79 296 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 GOLGA8BA8MQT2 603 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 PPP1R11O60927 126 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-209ENST00000635828 CNMDO75829 334 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 ZNF543Q08ER8 600 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 IKQ13123 557 aaPredicted RBP9.97□□□□□ -0.81
CDKL5-209ENST00000635828 CCDC174Q6PII3 467 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 CPXCR1Q8N123 301 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 SHISA4Q96DD7 197 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 IL17RAQ96F46 866 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 TM6SF1Q9BZW5 370 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 FOXD4L1Q9NU39 408 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 RBPJLQ9UBG7 517 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
CDKL5-209ENST00000635828 C19orf81C9J6K1 198 aa9.96□□□□□ -0.81
CDKL5-209ENST00000635828 PSMA5P28066 241 aa9.96□□□□□ -0.81
CDKL5-209ENST00000635828 TAF1CQ15572 869 aaPredicted RBP9.96□□□□□ -0.81
CDKL5-209ENST00000635828 HOMER1Q86YM7 354 aa9.96□□□□□ -0.81
CDKL5-209ENST00000635828 TMEM87BQ96K49 555 aa9.96□□□□□ -0.81
CDKL5-209ENST00000635828 AGBL1Q96MI9 1066 aa9.96□□□□□ -0.81
CDKL5-209ENST00000635828 MANSC4A6NHS7 340 aaPredicted RBP9.96□□□□□ -0.82
CDKL5-209ENST00000635828 EPB41L2O43491 1005 aaKnown RBP9.96□□□□□ -0.82
CDKL5-209ENST00000635828 LIFRP42702 1097 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 HERVK_113P62684 666 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 TMEM132BQ14DG7 1078 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 SGMS1Q86VZ5 419 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 C12orf42Q96LP6 360 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 AIFM3Q96NN9 605 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 PURBQ96QR8 312 aaKnown RBP9.96□□□□□ -0.82
CDKL5-209ENST00000635828 PORCNQ9H237 461 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 UPF2Q9HAU5 1272 aaKnown RBP9.96□□□□□ -0.82
CDKL5-209ENST00000635828 PRR12Q9ULL5 1215 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 LAMA3Q16787 3333 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 KLRF2D3W0D1 207 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 ADGRF4Q8IZF3 695 aa9.96□□□□□ -0.82
CDKL5-209ENST00000635828 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms