RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 LZTS2Q9BRK4 669 aa11.52□□□□□ -0.56
CACNA1A-216ENST00000635742 KANSL2Q9H9L4 492 aa11.52□□□□□ -0.56
CACNA1A-216ENST00000635742 NYAP2Q9P242 653 aa11.52□□□□□ -0.56
CACNA1A-216ENST00000635742 XBP1P17861 261 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 BRD2P25440 801 aaKnown RBP11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 NASPP49321 788 aaPredicted RBP11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 ZNF543Q08ER8 600 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 RASA3Q14644 834 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 ZSCAN23Q3MJ62 389 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 ASPRV1Q53RT3 343 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 WWC2Q6AWC2 1192 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 TYW1BQ6NUM6 668 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 TRPM4Q8TD43 1214 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 TEPSINQ96N21 525 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 UBA5Q9GZZ9 404 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 FOXP1Q9H334 677 aaPredicted RBP11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 HACL1Q9UJ83 578 aa11.52□□□□□ -0.57
CACNA1A-216ENST00000635742 FAM205CA6NFA0 338 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 ADAMTS3O15072 1205 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 KRT2P35908 639 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 TNNI2P48788 182 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 ANO1Q5XXA6 986 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 MIGA2Q7L4E1 593 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 HOMER1Q86YM7 354 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 GPC2Q8N158 579 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 LINC00301Q8NCQ3 95 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 MKL1Q969V6 931 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
CACNA1A-216ENST00000635742 STXBP3O00186 592 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 TBC1D12O60347 775 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 YEATS4O95619 227 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 LIG1P18858 919 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 STK38Q15208 465 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 CCDC96Q2M329 555 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 NOM1Q5C9Z4 860 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 EARS2Q5JPH6 523 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 TTBK2Q6IQ55 1244 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 HEATR3Q7Z4Q2 680 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 TNFRSF25Q93038 417 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 PIGSQ96S52 555 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 GPRC5DQ9NZD1 345 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 ZBTB21Q9ULJ3 1066 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 SMARCA1P28370 1054 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 TOB1P50616 345 aaPredicted RBP11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 NLRP5P59047 1200 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 TNFAIP1Q13829 316 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 SF3A1Q15459 793 aaKnown RBP11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 KCTD1Q719H9 257 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 RIOX1Q9H6W3 641 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 CABP5Q9NP86 173 aa11.5□□□□□ -0.57
CACNA1A-216ENST00000635742 A0A1W2PRG0 241 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 GOLGA6L4A6NEF3 574 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 H7C1D1 291 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 CDK11BP21127 795 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 DEKP35659 375 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 EPS15P42566 896 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 PTPAQ15257 358 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 SLFN13Q68D06 897 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 GAS2L3Q86XJ1 694 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 BICD2Q8TD16 824 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 RRP36Q96EU6 259 aaKnown RBP11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 VAT1LQ9HCJ6 419 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 SH3GLB2Q9NR46 395 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 PCDHA7Q9UN72 937 aa11.49□□□□□ -0.57
CACNA1A-216ENST00000635742 SYCE3A1L190 88 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 SPTLC2O15270 562 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 RAD21O60216 631 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 DDNO94850 711 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 NDUFB10O96000 172 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 ECE1P42892 770 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 ZNF445P59923 1031 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 MAP3K10Q02779 954 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 ANGEL2Q5VTE6 544 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 KCNG4Q8TDN1 519 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 DCAF4Q8WV16 495 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 GOLPH3LQ9H4A5 285 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 BRMS1Q9HCU9 246 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 BARHL2Q9NY43 387 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 FSD2A1L4K1 749 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 F5H6K3 240 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 WNT7AO00755 349 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 SLC16A2P36021 539 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 ME1P48163 572 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 HIRAP54198 1017 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 KLRC3Q07444 240 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 SLC39A14Q15043 492 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 GPATCH4Q5T3I0 446 aaKnown RBP11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 CCDC183Q5T5S1 534 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 CCDC84Q86UT8 332 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 GMCL1P1Q8NEA9 526 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 ACER1Q8TDN7 264 aa11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 SYAP1Q96A49 352 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 NUP88Q99567 741 aaPredicted RBP11.48□□□□□ -0.57
CACNA1A-216ENST00000635742 DEFB129Q9H1M3 183 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms