RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 SRBD1Q8N5C6 995 aaKnown RBP17.21■□□□□ 0.35
LIMS4-203ENST00000632758 UBA5Q9GZZ9 404 aa17.21■□□□□ 0.35
LIMS4-203ENST00000632758 ATAD5Q96QE3 1844 aa17.21■□□□□ 0.35
LIMS4-203ENST00000632758 UNCXA6NJT0 531 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 CPLX1O14810 134 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 SLC1A4P43007 532 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 HMGCS2P54868 508 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 FSTL1Q12841 308 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 NSUN7Q8NE18 718 aaKnown RBP17.2■□□□□ 0.34
LIMS4-203ENST00000632758 DCAF4Q8WV16 495 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 GMCL1Q96IK5 515 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
LIMS4-203ENST00000632758 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
LIMS4-203ENST00000632758 OTOFQ9HC10 1997 aa17.2■□□□□ 0.34
LIMS4-203ENST00000632758 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 KLRF2D3W0D1 207 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 HSP90AA1P07900 732 aaKnown RBP17.19■□□□□ 0.34
LIMS4-203ENST00000632758 KIF5BP33176 963 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 SLC16A2P36021 539 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 FUT2Q10981 343 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 PPIL2Q13356 520 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 PPP2R5BQ15173 497 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 FAM83BQ5T0W9 1011 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 SAPCD2Q86UD0 394 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 PHKBQ93100 1093 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 DDX11Q96FC9 970 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 INTS4Q96HW7 963 aaKnown RBP17.19■□□□□ 0.34
LIMS4-203ENST00000632758 ISY1Q9ULR0 285 aaKnown RBP17.19■□□□□ 0.34
LIMS4-203ENST00000632758 C19orf81C9J6K1 198 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 DHX16O60231 1041 aaKnown RBP17.19■□□□□ 0.34
LIMS4-203ENST00000632758 BMP3P12645 472 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 USP14P54578 494 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 MKRN3Q13064 507 aaKnown RBP17.19■□□□□ 0.34
LIMS4-203ENST00000632758 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
LIMS4-203ENST00000632758 hCG_1642624A0A1W2PR95 340 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 CYTH3O43739 400 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 FDPSP14324 419 aaKnown RBP17.18■□□□□ 0.34
LIMS4-203ENST00000632758 IFNAR1P17181 557 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 GNAQP50148 359 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 SH3D19Q5HYK7 790 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 WNK4Q96J92 1243 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
LIMS4-203ENST00000632758 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 KCNH4Q9UQ05 1017 aa17.18■□□□□ 0.34
LIMS4-203ENST00000632758 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.18■□□□□ 0.34
LIMS4-203ENST00000632758 MYH4Q9Y623 1939 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 TMEM88BA6NKF7 163 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 CXCL11O14625 94 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 VCAM1P19320 739 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
LIMS4-203ENST00000632758 PIBF1Q8WXW3 757 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 LPAR1Q92633 364 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 SMC3Q9UQE7 1217 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 TLL2Q9Y6L7 1015 aa17.17■□□□□ 0.34
LIMS4-203ENST00000632758 A0A0G2JLL6 359 aaPredicted RBP17.16■□□□□ 0.34
LIMS4-203ENST00000632758 GJB2P29033 226 aa17.16■□□□□ 0.34
LIMS4-203ENST00000632758 CPLX2Q6PUV4 134 aaKnown RBP17.16■□□□□ 0.34
LIMS4-203ENST00000632758 PRRT2Q7Z6L0 340 aaPredicted RBP17.16■□□□□ 0.34
LIMS4-203ENST00000632758 C12orf42Q96LP6 360 aa17.16■□□□□ 0.34
LIMS4-203ENST00000632758 FBXO28Q9NVF7 368 aa17.16■□□□□ 0.34
LIMS4-203ENST00000632758 TMOD4Q9NZQ9 345 aa17.16■□□□□ 0.34
LIMS4-203ENST00000632758 V9GY48 417 aaPredicted RBP17.16■□□□□ 0.34
LIMS4-203ENST00000632758 PHIPQ8WWQ0 1821 aa17.16■□□□□ 0.34
LIMS4-203ENST00000632758 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
LIMS4-203ENST00000632758 FMNL1O95466 1100 aaPredicted RBP17.15■□□□□ 0.34
LIMS4-203ENST00000632758 ZNF157P51786 506 aaPredicted RBP17.15■□□□□ 0.34
LIMS4-203ENST00000632758 SSRP1Q08945 709 aaKnown RBP17.15■□□□□ 0.34
LIMS4-203ENST00000632758 MOGSQ13724 837 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 SPRYD7Q5W111 196 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 RPAP3Q9H6T3 665 aaPredicted RBP17.15■□□□□ 0.34
LIMS4-203ENST00000632758 RIOX1Q9H6W3 641 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 ORC3Q9UBD5 711 aaPredicted RBP17.15■□□□□ 0.34
LIMS4-203ENST00000632758 ABT1Q9ULW3 272 aaKnown RBP17.15■□□□□ 0.34
LIMS4-203ENST00000632758 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 TRPM7Q96QT4 1865 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 CDKL5O76039 1030 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 TREML2Q5T2D2 321 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 RGMBQ6NW40 437 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 BTNL9Q6UXG8 535 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 GADL1Q6ZQY3 521 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 ADGRF4Q8IZF3 695 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 MS4A4AQ96JQ5 239 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 JMJD4Q9H9V9 463 aa17.15■□□□□ 0.34
LIMS4-203ENST00000632758 PRPF3O43395 683 aaKnown RBP17.14■□□□□ 0.33
LIMS4-203ENST00000632758 SNAP25P60880 206 aa17.14■□□□□ 0.33
LIMS4-203ENST00000632758 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
LIMS4-203ENST00000632758 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
LIMS4-203ENST00000632758 RASAL3Q86YV0 1011 aa17.14■□□□□ 0.33
LIMS4-203ENST00000632758 AIFM3Q96NN9 605 aa17.14■□□□□ 0.33
LIMS4-203ENST00000632758 PIGSQ96S52 555 aa17.14■□□□□ 0.33
LIMS4-203ENST00000632758 SPZ1Q9BXG8 430 aa17.14■□□□□ 0.33
LIMS4-203ENST00000632758 SMARCA1P28370 1054 aa17.13■□□□□ 0.33
LIMS4-203ENST00000632758 HMGN5P82970 282 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms