RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 PFKFB2O60825 505 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 PLEKHA8P1O95397 391 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 GOLGA8HP0CJ92 632 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 HSPA6P17066 643 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 HOXA7P31268 230 aaPredicted RBP9.74□□□□□ -0.85
MECP2-220ENST00000631210 ADD1P35611 737 aaKnown RBP9.74□□□□□ -0.85
MECP2-220ENST00000631210 VEGFBP49765 207 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 SCRN1Q12765 414 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 SNAPC2Q13487 334 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 FAM83BQ5T0W9 1011 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 BTNL9Q6UXG8 535 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 KCTD1Q719H9 257 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 NOL8Q76FK4 1167 aaKnown RBP9.74□□□□□ -0.85
MECP2-220ENST00000631210 CCDC144CPQ8IYA2 1237 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 FAM43AQ8N2R8 423 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 DNAJC5GQ8N7S2 189 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 FANCBQ8NB91 859 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 PROCA1Q8NCQ7 364 aaPredicted RBP9.74□□□□□ -0.85
MECP2-220ENST00000631210 DCAF4Q8WV16 495 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 LPAR1Q92633 364 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 TMX3Q96JJ7 454 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 CAPNS2Q96L46 248 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 NCOA5Q9HCD5 579 aaKnown RBP9.74□□□□□ -0.85
MECP2-220ENST00000631210 FBXO28Q9NVF7 368 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 SLC12A7Q9Y666 1083 aa9.74□□□□□ -0.85
MECP2-220ENST00000631210 FRMPD2Q68DX3 1309 aaPredicted RBP9.74□□□□□ -0.85
MECP2-220ENST00000631210 CCL15-CCL14A0A0B4J2E2 113 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 GOLGA8BA8MQT2 603 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 WDR46O15213 610 aaKnown RBP9.73□□□□□ -0.85
MECP2-220ENST00000631210 ZBTB43O43298 467 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 PLA2G6O60733 806 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 BMP3P12645 472 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 TM4SF4P48230 202 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 GTF2A2P52657 109 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 USP14P54578 494 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 KIF23Q02241 960 aaPredicted RBP9.73□□□□□ -0.85
MECP2-220ENST00000631210 ANKRD1Q15327 319 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 CCL15Q16663 113 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 CATSPERGQ6ZRH7 1159 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 TMTC3Q6ZXV5 915 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 CATIPQ7Z7H3 387 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 MICU3Q86XE3 530 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
MECP2-220ENST00000631210 SRBD1Q8N5C6 995 aaKnown RBP9.73□□□□□ -0.85
MECP2-220ENST00000631210 NECAB1Q8N987 351 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 IL27Q8NEV9 243 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 REPS2Q8NFH8 660 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 MTMR8Q96EF0 704 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 FEZ1Q99689 392 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 UBA5Q9GZZ9 404 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 RPAP3Q9H6T3 665 aaPredicted RBP9.73□□□□□ -0.85
MECP2-220ENST00000631210 SH2D4AQ9H788 454 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 GOPCQ9HD26 462 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 ADAMTS5Q9UNA0 930 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 LIMCH1Q9UPQ0 1083 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 AGTPBP1Q9UPW5 1226 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 MTMR7Q9Y216 660 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 ADGRA2Q96PE1 1338 aa9.73□□□□□ -0.85
MECP2-220ENST00000631210 GOLGA8AA7E2F4 631 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 ST18O60284 1047 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 CETPP11597 493 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 SLC16A2P36021 539 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 SLC1A4P43007 532 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 CCT2P78371 535 aaKnown RBP9.72□□□□□ -0.85
MECP2-220ENST00000631210 STK3Q13188 491 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 CUL4AQ13619 759 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 ASPRV1Q53RT3 343 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 GADL1Q6ZQY3 521 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 ANKRD23Q86SG2 305 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 NUP133Q8WUM0 1156 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 GTF3C6Q969F1 213 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 SHISA4Q96DD7 197 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 ASCC2Q9H1I8 757 aaPredicted RBP9.72□□□□□ -0.85
MECP2-220ENST00000631210 RIOX1Q9H6W3 641 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 GPCPD1Q9NPB8 672 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 CNTNAP5Q8WYK1 1306 aa9.72□□□□□ -0.85
MECP2-220ENST00000631210 WDR33Q9C0J8 1336 aaKnown RBP9.72□□□□□ -0.85
MECP2-220ENST00000631210 COL11A1P12107 1806 aaPredicted RBP9.72□□□□□ -0.85
MECP2-220ENST00000631210 MANSC4A6NHS7 340 aaPredicted RBP9.71□□□□□ -0.86
MECP2-220ENST00000631210 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
MECP2-220ENST00000631210 USP17L15C9J2P7 530 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 USP17L13C9JLJ4 530 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 TMEM232C9JQI7 657 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 USP17L11C9JVI0 530 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 KLRF2D3W0D1 207 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 USP17L18D6R9N7 530 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 USP17L22D6RA61 530 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 USP17L17D6RBQ6 530 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 USP17L19D6RCP7 530 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 USP17L20D6RJB6 530 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 PEX10O60683 326 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 PPP1R11O60927 126 aaPredicted RBP9.71□□□□□ -0.86
MECP2-220ENST00000631210 CNMDO75829 334 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 PARP1P09874 1014 aaKnown RBP9.71□□□□□ -0.86
MECP2-220ENST00000631210 CALM1P0DP23 149 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 CALM2P0DP24 149 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 CALM3P0DP25 149 aa9.71□□□□□ -0.86
MECP2-220ENST00000631210 FDPSP14324 419 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms