RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SLC4A8Q2Y0W8 1093 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 ASPRV1Q53RT3 343 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 TTC38Q5R3I4 469 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 ARL6IP4Q66PJ3 421 aaKnown RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 C11orf57Q6ZUT1 292 aaPredicted RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 RTKN2Q8IZC4 609 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 ZNF713Q8N859 430 aaPredicted RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 C4orf32Q8N8J7 132 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 CNNM3Q8NE01 707 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 CCDC148Q8NFR7 591 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 SPATA20Q8TB22 786 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 CCDC12Q8WUD4 166 aaPredicted RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 FBXW7Q969H0 707 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 CEP95Q96GE4 821 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 MRFAP1L1Q96HT8 127 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 PYM1Q9BRP8 204 aaKnown RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 MXD3Q9BW11 206 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 ZMYND12Q9H0C1 365 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 CSRNP2Q9H175 543 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 DBNDD1Q9H9R9 158 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 KCNQ5Q9NR82 932 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 PCDHA6Q9UN73 950 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 STX8Q9UNK0 236 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 PCDHA8Q9Y5H6 950 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 GREB1LQ9C091 1923 aaPredicted RBP6.36□□□□□ -1.39
NEK3-211ENST00000629912 PSME4Q14997 1843 aa6.36□□□□□ -1.39
NEK3-211ENST00000629912 ESYT2A0FGR8 921 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 FAM205CA6NFA0 338 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 LAD1O00515 517 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 POLR2DO15514 142 aaKnown RBP6.35□□□□□ -1.39
NEK3-211ENST00000629912 ACTN4O43707 911 aaKnown RBP6.35□□□□□ -1.39
NEK3-211ENST00000629912 ENTPD3O75355 529 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 TTLL1O95922 423 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 SLFN14P0C7P3 912 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 PDHBP11177 359 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 AKR1B1P15121 316 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 GNA11P29992 359 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 BAG6P46379 1132 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 GRIN1Q05586 938 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 PTGDRQ13258 359 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 ORC2Q13416 577 aaPredicted RBP6.35□□□□□ -1.39
NEK3-211ENST00000629912 NCAPHQ15003 741 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 ZNF174Q15697 407 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 WWC2Q6AWC2 1192 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 TATDN1Q6P1N9 297 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 SH3RF1Q7Z6J0 888 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 TTLL6Q8N841 843 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 TRIML1Q8N9V2 468 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 RRP36Q96EU6 259 aaKnown RBP6.35□□□□□ -1.39
NEK3-211ENST00000629912 CCDC34Q96HJ3 373 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 PSMD1Q99460 953 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 TRIM5Q9C035 493 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 C6orf50Q9HD87 102 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 RTN4Q9NQC3 1192 aaKnown RBP6.35□□□□□ -1.39
NEK3-211ENST00000629912 PI4KBQ9UBF8 816 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 CLIP2Q9UDT6 1046 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 SERTAD1Q9UHV2 236 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 PCDHA5Q9Y5H7 936 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 MYH4Q9Y623 1939 aa6.35□□□□□ -1.39
NEK3-211ENST00000629912 SMCO2A6NFE2 343 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 USP17L5A8MUK1 530 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 ADAMTS3O15072 1205 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 OFD1O75665 1012 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 SMC2O95347 1197 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
NEK3-211ENST00000629912 ATP2B1P20020 1258 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 KCNA3P22001 575 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 LONP1P36776 959 aaKnown RBP6.34□□□□□ -1.39
NEK3-211ENST00000629912 PRPHP41219 470 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 MMP14P50281 582 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 TPM4P67936 248 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 PLCB2Q00722 1185 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 ZNF543Q08ER8 600 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 NFIAQ12857 509 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 SEMA3FQ13275 785 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 SF3B2Q13435 895 aaKnown RBP6.34□□□□□ -1.39
NEK3-211ENST00000629912 PICALMQ13492 652 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 PNOCQ13519 176 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 MORC3Q14149 939 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 DHX8Q14562 1220 aaKnown RBP6.34□□□□□ -1.39
NEK3-211ENST00000629912 POSTNQ15063 836 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 AOC3Q16853 763 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 DPCR1Q3MIW9 517 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 CCDC93Q567U6 631 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 NOM1Q5C9Z4 860 aaKnown RBP6.34□□□□□ -1.39
NEK3-211ENST00000629912 GPATCH4Q5T3I0 446 aaKnown RBP6.34□□□□□ -1.39
NEK3-211ENST00000629912 TYW1BQ6NUM6 668 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 USP17L2Q6R6M4 530 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 PIK3AP1Q6ZUJ8 805 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 KRT25Q7Z3Z0 450 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 CCDC125Q86Z20 511 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 KIAA0825Q8IV33 1275 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 ZFPM1Q8IX07 1006 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 MLKLQ8NB16 471 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 ERCC4Q92889 916 aaPredicted RBP6.34□□□□□ -1.39
NEK3-211ENST00000629912 MTMR8Q96EF0 704 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 GMLQ99445 158 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 KANSL2Q9H9L4 492 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 NYAP2Q9P242 653 aa6.34□□□□□ -1.39
NEK3-211ENST00000629912 FAM198AQ9UFP1 575 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms