RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 WDR46O15213 610 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 AKR1B1P15121 316 aa18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 TLE2Q04725 743 aa18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 TMEM132BQ14DG7 1078 aa18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 RNF180Q86T96 592 aa18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 SIAH1Q8IUQ4 282 aa18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 MMP19Q99542 508 aa18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 ARMT1Q9H993 441 aa18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 NRBP1Q9UHY1 535 aa18.88■□□□□ 0.61
PDLIM3-213ENST00000629667 AMOTL1Q8IY63 956 aa18.87■□□□□ 0.61
PDLIM3-213ENST00000629667 MYLIPQ8WY64 445 aa18.87■□□□□ 0.61
PDLIM3-213ENST00000629667 CCDC17Q96LX7 622 aa18.87■□□□□ 0.61
PDLIM3-213ENST00000629667 BCL11AQ9H165 835 aa18.87■□□□□ 0.61
PDLIM3-213ENST00000629667 ATP8A2Q9NTI2 1148 aa18.87■□□□□ 0.61
PDLIM3-213ENST00000629667 PHF24Q9UPV7 400 aa18.87■□□□□ 0.61
PDLIM3-213ENST00000629667 PRUNE2Q8WUY3 3088 aa18.87■□□□□ 0.61
PDLIM3-213ENST00000629667 APBB1O00213 710 aa18.86■□□□□ 0.61
PDLIM3-213ENST00000629667 CLTBP09497 229 aa18.86■□□□□ 0.61
PDLIM3-213ENST00000629667 IFIT2P09913 472 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-213ENST00000629667 KCTD2Q14681 263 aa18.86■□□□□ 0.61
PDLIM3-213ENST00000629667 KIF1BPQ96EK5 621 aa18.86■□□□□ 0.61
PDLIM3-213ENST00000629667 RNPC3Q96LT9 517 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-213ENST00000629667 TINF2Q9BSI4 451 aa18.86■□□□□ 0.61
PDLIM3-213ENST00000629667 TTYH1Q9H313 450 aaPredicted RBP18.86■□□□□ 0.61
PDLIM3-213ENST00000629667 PRKAB2O43741 272 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 MBD4O95243 580 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 PGK1P00558 417 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 PGK2P07205 417 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 FOSL2P15408 326 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 RAG1P15918 1043 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 CDK8P49336 464 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 RIOX2Q8IUF8 465 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 ADAMTS5Q9UNA0 930 aa18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 DIS3Q9Y2L1 958 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-213ENST00000629667 MYH7P12883 1935 aa18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 RAD21O60216 631 aa18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 PQBP1O60828 265 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 EEF2P13639 858 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 ITGB8P26012 769 aa18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 STAT3P40763 770 aa18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 C12orf60Q5U649 245 aa18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 DDRGK1Q96HY6 314 aa18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 FBXO28Q9NVF7 368 aa18.84■□□□□ 0.61
PDLIM3-213ENST00000629667 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 A0A1W2PQ45 241 aaPredicted RBP18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 A0A1W2PQY0 241 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 USP17L12C9JPN9 530 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 USP17L21D6R901 530 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 AKR1A1P14550 325 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 ADD2P35612 726 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 ZNF792Q3KQV3 632 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 KANSL2Q9H9L4 492 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 GOPCQ9HD26 462 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 TMEM39AQ9NV64 488 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 PAG1Q9NWQ8 432 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 CNPY2Q9Y2B0 182 aa18.83■□□□□ 0.6
PDLIM3-213ENST00000629667 TMEM265A0A087WTH1 108 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 SMIM22K7EJ46 135 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 VWA5AO00534 786 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 KIAA0355O15063 1070 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 TAL1P17542 331 aaPredicted RBP18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 COPB2P35606 906 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 FPGSQ05932 587 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 SLFNL1Q499Z3 407 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 C16orf86Q6ZW13 317 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 PANK1Q8TE04 598 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 BOLA2Q9H3K6 86 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 PPP1R9AQ9ULJ8 1098 aa18.82■□□□□ 0.6
PDLIM3-213ENST00000629667 ROBO3Q96MS0 1386 aa18.81■□□□□ 0.6
PDLIM3-213ENST00000629667 ZNF865P0CJ78 1059 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-213ENST00000629667 EPHB4P54760 987 aa18.81■□□□□ 0.6
PDLIM3-213ENST00000629667 HNRNPUQ00839 825 aaKnown RBP eCLIP18.81■□□□□ 0.6
PDLIM3-213ENST00000629667 FAM83BQ5T0W9 1011 aa18.81■□□□□ 0.6
PDLIM3-213ENST00000629667 ZNF214Q9UL59 606 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-213ENST00000629667 DCDC2CA8MYV0 355 aa18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 HMMRO75330 724 aa18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 RPAP2Q8IXW5 612 aaPredicted RBP18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 NUP133Q8WUM0 1156 aa18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 LENG1Q96BZ8 264 aaPredicted RBP18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 TSEN34Q9BSV6 310 aaKnown RBP18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 STARD7Q9NQZ5 370 aa18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 SLC4A4Q9Y6R1 1079 aa18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 SPTBN5Q9NRC6 3674 aaKnown RBP18.8■□□□□ 0.6
PDLIM3-213ENST00000629667 ADAMTS4O75173 837 aa18.79■□□□□ 0.6
PDLIM3-213ENST00000629667 ACLYP53396 1101 aa18.79■□□□□ 0.6
PDLIM3-213ENST00000629667 FAAP100Q0VG06 881 aa18.79■□□□□ 0.6
PDLIM3-213ENST00000629667 ANKRD33Q7Z3H0 272 aa18.79■□□□□ 0.6
PDLIM3-213ENST00000629667 SYMPKQ92797 1274 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-213ENST00000629667 DDX11Q96FC9 970 aa18.79■□□□□ 0.6
PDLIM3-213ENST00000629667 TOX2Q96NM4 488 aa18.79■□□□□ 0.6
PDLIM3-213ENST00000629667 FAM184BQ9ULE4 1060 aa18.79■□□□□ 0.6
PDLIM3-213ENST00000629667 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-213ENST00000629667 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-213ENST00000629667 MOXD2PA6NHM9 499 aa18.78■□□□□ 0.6
PDLIM3-213ENST00000629667 RAB11FIP3O75154 756 aa18.78■□□□□ 0.6
PDLIM3-213ENST00000629667 ATP5JP18859 108 aa18.78■□□□□ 0.6
PDLIM3-213ENST00000629667 UBE3CQ15386 1083 aa18.78■□□□□ 0.6
PDLIM3-213ENST00000629667 MSL3Q8N5Y2 521 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms