RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 TMX2Q9Y320 296 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 SIPA1L1O43166 1804 aa11.72□□□□□ -0.53
FOXCUT-201ENST00000628509 MYH6P13533 1939 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 JAK2O60674 1132 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 EGFRP00533 1210 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 RXRAP19793 462 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 GNA11P29992 359 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 CDC27P30260 824 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 FKBP1BP68106 108 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 KRT85P78386 507 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 NTRK3Q16288 839 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 NOL9Q5SY16 702 aaKnown RBP11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 MCTP1Q6DN14 999 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 CLEC17AQ6ZS10 378 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 FBXO18Q8NFZ0 1043 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 DCBLD2Q96PD2 775 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 WRNIP1Q96S55 665 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 SCAND2PQ9GZW5 306 aaPredicted RBP11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 ZNF112Q9UJU3 913 aa11.71□□□□□ -0.53
FOXCUT-201ENST00000628509 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 USP17L10C9JJH3 530 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 F5H6K3 240 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 SMIM22K7EJ46 135 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 CTDNEP1O95476 244 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 SNHG28P0DPA3 235 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 BMP3P12645 472 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 SCG2P13521 617 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 HIRAP54198 1017 aaPredicted RBP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 KLRC3Q07444 240 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 PFKFB3Q16875 520 aaPredicted RBP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 SKOR2Q2VWA4 1001 aaPredicted RBP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 NBPF12Q5TAG4 269 aaPredicted RBP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 PPP1R18Q6NYC8 613 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 LRRC47Q8N1G4 583 aaKnown RBP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 WDR18Q9BV38 432 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 KIAA1683Q9H0B3 1180 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 VCPKMTQ9H867 229 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 SENP2Q9HC62 589 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 MAD2L2Q9UI95 211 aa11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 CTDP1Q9Y5B0 961 aaPredicted RBP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 V9GY48 417 aaPredicted RBP11.7□□□□□ -0.54
FOXCUT-201ENST00000628509 PHF20L1A8MW92 1017 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 WDR46O15213 610 aaKnown RBP11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 PLA2G6O60733 806 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 STAT2P52630 851 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 NLRP5P59047 1200 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 ST3GAL1Q11201 340 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 COL9A3Q14050 684 aaPredicted RBP11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 RAB11FIP4Q86YS3 637 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 CCDC82Q8N4S0 544 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 TNPO1Q92973 898 aaKnown RBP11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 PHKBQ93100 1093 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 KLRG1Q96E93 195 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 FOXP1Q9H334 677 aaPredicted RBP11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 C6orf50Q9HD87 102 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 FEM1BQ9UK73 627 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 NOL7Q9UMY1 257 aaKnown RBP11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 ATAD5Q96QE3 1844 aa11.69□□□□□ -0.54
FOXCUT-201ENST00000628509 CNTNAP5Q8WYK1 1306 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 BMP15O95972 392 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 KRT2P35908 639 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 RIOX1Q9H6W3 641 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
FOXCUT-201ENST00000628509 GOLGA6L4A6NEF3 574 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 ZBTB5O15062 677 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 PLEKHA8P1O95397 391 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 NDUFB10O96000 172 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 MMP1P03956 469 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 PABPC4Q13310 644 aaKnown RBP eCLIP11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 MAP3K11Q16584 847 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 KRT40Q6A162 431 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 SRBD1Q8N5C6 995 aaKnown RBP11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 C2orf69Q8N8R5 385 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 ZNF579Q8NAF0 562 aaKnown RBP11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 CDCA5Q96FF9 252 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
FOXCUT-201ENST00000628509 ASTN2O75129 1339 aaPredicted RBP11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 ESYT2A0FGR8 921 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
FOXCUT-201ENST00000628509 BAG4O95429 457 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms